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View Structure Prediction Details

Protein: gi|190690245, gi...
Organism: synthetic construct
Length: 143 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190690245, gi....

Description E-value Query
Range
Subject
Range
LAGE3_MOUSE - EKC/KEOPS complex subunit Lage3 OS=Mus musculus GN=Lage3 PE=2 SV=1
184.0 [0..1] [142..1]
gi|157821989, gi... - gi|34881763|ref|XP_215227.2| PREDICTED: similar to Eso3 protein [Rattus norvegicus], gi|157821989|re...
182.0 [0..1] [142..1]
gi|109111264 - gi|109111264|ref|XP_001102130.1| PREDICTED: similar to ESO3 protein [Macaca mulatta]
164.0 [0..1] [143..1]

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Predicted Domain #1
Region A:
Residues: [1-70]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDADADAGG GADGGDGRGG HSCRGGVDTA AAPAGGAPPA HAPGPGRDAA SAARGSRMRP  60
   61 HIFTLSVPFP 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [71-143]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPLEAEIAHG SLAPDAEPHQ RVVGKDLTVS GRILVVRWKA EDCRLLRISV INFLDQLSLV  60
   61 VRTMQRFGPP VSR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 43.657577
Match: PF09341.1
Description: No description for PF09341.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle