| Protein: | gi|190406908 |
| Organism: | Saccharomyces cerevisiae RM11-1a |
| Length: | 860 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190406908.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..860] | [1..860] |
|
Region A: Residues: [1-72] |
1 11 21 31 41 51
| | | | | |
1 MNTALDDLHG DLVTLEDNEI INNSDHSSSH STSHEEEDEE EDDTEDIELI EKDGNKILSS 60
61 RIHPEDEIIN DG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [73-152] |
1 11 21 31 41 51
| | | | | |
1 LNIWIPVQML KKNIAKFWSH FLAIEKKLTK VKCKHCGEIL TRSDASLTKT FRSHLKTKHN 60
61 ISANKNFYSM NFTVGDSNLK
|
| Detection Method: | |
| Confidence: | 13.508638 |
| Match: | PF02892 |
| Description: | BED zinc finger |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| nuclease activity | 0.684822695593649 | bayes_pls_golite062009 |
| catalytic activity | 0.402379787166751 | bayes_pls_golite062009 |
| hydrolase activity | 0.253454833507999 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.223965050767284 | bayes_pls_golite062009 |
| binding | 0.0417104526044634 | bayes_pls_golite062009 |
|
Region A: Residues: [153-455] |
1 11 21 31 41 51
| | | | | |
1 NNTSSTEITR RHGYDSLTFN SDQSFKCFDI GKLQSSNYLS ISQLVAIVIA SENLPLNFFE 60
61 NVSFKSLLSK FHRIPPLTTN IIEESIIGLS KSIDELIRRS ISRNDTQLPF TIHLSDSKES 120
121 NQPLYLKYSR EIRAQLSNLD LSHLISVNFT ELAGKRSLFS LQLFDNTNKV SKGLPLSIFV 180
181 RKTTDIDISV WQEQLNNLYS KYPGLQKSVI SITLPQSHYT MVLENRNSHN FTFHSGSVRE 240
241 IKYHTCIVSE LLHCFLQPLF NVPTESMLSS FSVAKENHSG GSLLDSLIDF SHIDLSSTIL 300
301 GKI
|
| Detection Method: | |
| Confidence: | 7.13 |
| Match: | 1h6kA |
| Description: | CBP80, 80KDa nuclear cap-binding protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [456-656] |
1 11 21 31 41 51
| | | | | |
1 CCLIEEVNLN DSLKSDFLLY CQNYTQPNCN ELTSILSCNC DRFSALKSIL EKFANLVPFF 60
61 KSINSHLENE SLSESDFRLI NTVEETLRTF EQSIEYFASS APLKFTHTLV FIIKFELYLT 120
121 EIIRSFKFTK SKKPFEKILA RLLKVKDLYL LDDVNLIGAF LYPSIFQSKS LLNEIFGTTS 180
181 VNKIVHNMTK IVLRYLKNFI N
|
| Detection Method: | |
| Confidence: | 7.13 |
| Match: | 1h6kA |
| Description: | CBP80, 80KDa nuclear cap-binding protein |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [657-736] |
1 11 21 31 41 51
| | | | | |
1 ITNFRSSNSG GESGRNSGNN LLSDYEAIFM KESRDVELLC NTKLTAPLTE DSLLVQIIRD 60
61 DLLRYVNRIA HELPNAYHDY
|
| Detection Method: | |
| Confidence: | 7.28 |
| Match: | 1e8yA |
| Description: | Phoshoinositide 3-kinase (PI3K) helical domain; Phoshoinositide 3-kinase (PI3K); Phoshoinositide 3-kinase (PI3K), catalytic domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [737-860] |
1 11 21 31 41 51
| | | | | |
1 LNDNDISFDG SHFTKHELSE ENDSNSGEWC LNPMEETFDI HIPISDSIWN NYISSKNKIE 60
61 VIDILLQLLS VNSTSSIRSE LSSLTANQDF STKLSEETIK IKLLNSQFNL EKINFHSGSI 120
121 FDAC
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.345 | a.74.1 | Cyclin-like |
| View | Download | 0.492 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.597 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.285 | a.77.1 | DEATH domain |
| View | Download | 0.280 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.270 | a.118.8 | TPR-like |
| View | Download | 0.262 | a.118.8 | TPR-like |
| View | Download | 0.248 | a.116.1 | GTPase activation domain, GAP |
| View | Download | 0.236 | a.77.1 | DEATH domain |
| View | Download | 0.234 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.226 | a.1.1 | Globin-like |
| View | Download | 0.220 | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.215 | a.66.1 | Transducin (alpha subunit), insertion domain |
