YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|213426384
Organism:	Salmonella enterica subsp. enterica serovar Typhi str. E02-1180
Length:	214 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|213426384.

Description	E-value	Query Range	Subject Range
CHEZ_SALTY - Chemotaxis protein cheZ OS=Salmonella typhimurium GN=cheZ PE=4 SV=1 CHEZ_SALTY - Protein phosphatase CheZ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=cheZ PE=... gi\|205327859, gi... - gi\|205327859\|gb\|EDZ14623.1\| chemotaxis protein CheZ [Salmonella enterica subsp. enterica serovar 4,[... CHEZ_SALTY - Protein phosphatase CheZ OS=Salmonella typhimurium GN=cheZ PE=1 SV=1 gi\|197288668, gi... - gi\|197288668\|gb\|EDY28043.1\| chemotaxis phosphatase CheZ [Salmonella enterica subsp. enterica serovar... gi\|56127422, gi\|... - gi\|56413165\|ref\|YP_150240.1\| chemotaxis regulator CheZ [Salmonella enterica subsp. enterica serovar ... lcl\|NC_016856.1_... - [gene=cheZ] [protein=chemotaxis regulator CheZ] [protein_id=YP_005237883.1] [location=complement(202... gi\|197093568, gi... - gi\|197362091\|ref\|YP_002141728.1\| chemotaxis regulator CheZ [Salmonella enterica subsp. enterica sero... gi\|204931092, gi... - gi\|204931092\|ref\|ZP_03221918.1\| chemotaxis protein CheZ [Salmonella enterica subsp. enterica serovar... gi\|205350863, gi... - gi\|205350863\|gb\|EDZ37494.1\| chemotaxis phosphatase CheZ [Salmonella enterica subsp. enterica serovar... gi\|205342730, gi... - gi\|205342730\|gb\|EDZ29494.1\| chemotaxis protein CheZ [Salmonella enterica subsp. enterica serovar Wel... gi\|238912508 - gi\|238912508\|ref\|ZP_04656345.1\| chemotaxis regulator CheZ [Salmonella enterica subsp. enterica serov... gi\|194737784, gi... - gi\|194737784\|ref\|YP_002114951.1\| chemotaxis phosphatase CheZ [Salmonella enterica subsp. enterica se... gi\|197248202, gi... - gi\|197248202\|ref\|YP_002146106.1\| chemotaxis protein CheZ [Salmonella enterica subsp. enterica serova...	3.0E-75	[1..214]	[1..214]
gi\|10566574 - gi\|10566574\|dbj\|BAB15842.1\| CheZ [Enterobacter cloacae]	9.0E-74	[1..214]	[1..215]
tr\|A0A0G3HGQ5\|A0... - Protein phosphatase CheZ OS=Escherichia coli (strain K12) GN=cheZ PE=3 SV=2 gi\|26248148, gi\|... - gi\|26248148\|ref\|NP_754188.1\| Chemotaxis protein cheZ [Escherichia coli CFT073], gi\|26108552\|gb\|AAN80... gi\|209912566, gi... - gi\|209919307\|ref\|YP_002293391.1\| chemotaxis regulator CheZ [Escherichia coli SE11], gi\|209912566\|dbj... gi\|226900594, gi... - gi\|237705837\|ref\|ZP_04536318.1\| chemotaxis protein cheZ [Escherichia sp. 3_2_53FAA], gi\|226900594\|gb... gi\|91072680, gi\|... - gi\|91211106\|ref\|YP_541092.1\| chemotaxis protein CheZ [Escherichia coli UTI89], gi\|91072680\|gb\|ABE075...	1.0E-73	[1..214]	[11..224]
gi\|145526 - gi\|145526\|gb\|AAA23571.1\| cheZ [Escherichia coli]	2.0E-73	[1..214]	[1..214]
gi\|15831845, gi\|... - gi\|15831845\|ref\|NP_310618.1\| chemotaxis regulator CheZ [Escherichia coli O157:H7 str. Sakai], gi\|133... gi\|217328863, gi... - gi\|217328863\|ref\|ZP_03444944.1\| chemotaxis phosphatase CheZ [Escherichia coli O157:H7 str. TW14588],... gi\|209160471, gi... - gi\|209399071\|ref\|YP_002270965.1\| chemotaxis phosphatase CheZ [Escherichia coli O157:H7 str. EC4115],... gi\|168801879, gi... - gi\|189376040\|gb\|EDU94456.1\| chemotaxis phosphatase CheZ [Escherichia coli O157:H7 str. EC508], gi\|16... gi\|168789750, gi... - gi\|189370649\|gb\|EDU89065.1\| chemotaxis phosphatase CheZ [Escherichia coli O157:H7 str. EC869], gi\|16... gi\|168783185, gi... - gi\|188999474\|gb\|EDU68460.1\| chemotaxis phosphatase CheZ [Escherichia coli O157:H7 str. EC4076], gi\|1... gi\|168776568, gi... - gi\|187768102\|gb\|EDU31946.1\| chemotaxis phosphatase CheZ [Escherichia coli O157:H7 str. EC4196], gi\|1... gi\|208738445, gi... - gi\|208818322\|ref\|ZP_03258642.1\| chemotaxis phosphatase CheZ [Escherichia coli O157:H7 str. EC4042], ... gi\|208816510, gi... - gi\|208816510\|ref\|ZP_03257630.1\| chemotaxis phosphatase CheZ [Escherichia coli O157:H7 str. EC4045], ... gi\|208810554, gi... - gi\|208810554\|ref\|ZP_03252430.1\| chemotaxis phosphatase CheZ [Escherichia coli O157:H7 str. EC4206], ... gi\|195939585 - gi\|195939585\|ref\|ZP_03084967.1\| chemotaxis regulator CheZ [Escherichia coli O157:H7 str. EC4024] CHEZ_ECO57 - Protein phosphatase CheZ OS=Escherichia coli O157:H7 GN=cheZ PE=3 SV=1 gi\|25298872, gi\|... - pir\|\|C85801 CheY protein phophatase [similarity] - Escherichia coli (strain O157:H7, substrain EDL9... gi\|168770868, gi... - gi\|189360262\|gb\|EDU78681.1\| chemotaxis phosphatase CheZ [Escherichia coli O157:H7 str. EC4486], gi\|1... gi\|15802293, gi\|... - gi\|15802293\|ref\|NP_288318.1\| chemotaxis regulator CheZ [Escherichia coli O157:H7 EDL933], gi\|1251594... gi\|168762321, gi... - gi\|189367404\|gb\|EDU85820.1\| chemotaxis phosphatase CheZ [Escherichia coli O157:H7 str. EC4501], gi\|1... gi\|189355180, gi... - gi\|189355180\|gb\|EDU73599.1\| chemotaxis phosphatase CheZ [Escherichia coli O157:H7 str. EC4401], gi\|1... gi\|188017479, gi... - gi\|188017479\|gb\|EDU55601.1\| chemotaxis phosphatase CheZ [Escherichia coli O157:H7 str. EC4113], gi\|1... CHEZ_ECO5T - Protein phosphatase CheZ OS=Escherichia coli O157:H7 (strain TW14359 / EHEC) GN=cheZ PE=3 SV=1	3.0E-73	[1..214]	[1..214]
gi\|37525787, gi\|... - gi\|37525787\|ref\|NP_929131.1\| chemotaxis regulator CheZ [Photorhabdus luminescens subsp. laumondii TT...	4.0E-73	[1..214]	[1..216]
gi\|123442796, gi... - gi\|123442796\|ref\|YP_001006773.1\| chemotaxis regulator CheZ [Yersinia enterocolitica subsp. enterocol... gi\|13811427 - gi\|13811427\|gb\|AAK40115.1\|AF354753_3 CheZ [Yersinia enterocolitica]	4.0E-73	[1..214]	[1..214]
gi\|77975737 - gi\|77975737\|ref\|ZP_00831271.1\| COG3143: Chemotaxis protein [Yersinia frederiksenii ATCC 33641]	4.0E-73	[1..214]	[1..214]
gi\|194412649, gi... - gi\|75209442\|ref\|ZP_00709670.1\| COG3143: Chemotaxis protein [Escherichia coli B171], gi\|194429342\|ref... gi\|191168068, gi... - gi\|75228738\|ref\|ZP_00715351.1\| COG3143: Chemotaxis protein [Escherichia coli B7A], gi\|191168068\|ref\|... gi\|193069894, gi... - gi\|75235315\|ref\|ZP_00719541.1\| COG3143: Chemotaxis protein [Escherichia coli E110019], gi\|193069894\|... EG10151 - chemotaxis regulator, protein phosphatase for CheY / CheY-P phosphatase gi\|191173020, gi... - gi\|75239699\|ref\|ZP_00723662.1\| COG3143: Chemotaxis protein [Escherichia coli F11], gi\|191173020\|ref\|... gi\|75256489, gi\|... - gi\|75256489\|ref\|ZP_00728135.1\| COG3143: Chemotaxis protein [Escherichia coli E22], gi\|193065491\|ref\|... gi\|188488579, gi... - gi\|75513027\|ref\|ZP_00735489.1\| COG3143: Chemotaxis protein [Escherichia coli 53638], gi\|188493380\|re... gi\|82543639, gi\|... - gi\|82543639\|ref\|YP_407586.1\| chemotaxis regulator CheZ [Shigella boydii Sb227], gi\|81245050\|gb\|ABB65... gi\|218352179, gi... - gi\|218695447\|ref\|YP_002403114.1\| chemotaxis regulator CheZ [Escherichia coli 55989], gi\|218352179\|em... gi\|218699548, gi... - gi\|218699548\|ref\|YP_002407177.1\| chemotaxis regulator CheZ [Escherichia coli IAI39], gi\|218369534\|em... gi\|218432478, gi... - gi\|218705381\|ref\|YP_002412900.1\| chemotaxis regulator CheZ [Escherichia coli UMN026], gi\|218432478\|e... gi\|194421999, gi... - gi\|83585519\|ref\|ZP_00924163.1\| COG3143: Chemotaxis protein [Escherichia coli 101-1], gi\|194439040\|re... gi\|157080846, gi... - gi\|75190909\|ref\|ZP_00704176.1\| COG3143: Chemotaxis protein [Escherichia coli E24377A], gi\|157158816\|... gi\|75195945, gi\|... - gi\|75195945\|ref\|ZP_00706015.1\| COG3143: Chemotaxis protein [Escherichia coli HS], gi\|157161353\|ref\|Y... gi\|110615409, gi... - gi\|110805861\|ref\|YP_689381.1\| chemotaxis regulator CheZ [Shigella flexneri 5 str. 8401], gi\|11061540... gi\|115513156, gi... - gi\|117624032\|ref\|YP_852945.1\| chemotaxis regulator CheZ [Escherichia coli APEC O1], gi\|115513156\|gb\|... gi\|124498826, gi... - gi\|124531087\|ref\|ZP_01701472.1\| chemotaxis phosphatase, CheZ [Escherichia coli B], gi\|124498826\|gb\|E... gi\|1736534, gi\|8... - gi\|89108721\|ref\|AP_002501.1\| chemotaxis regulator [Escherichia coli str. K-12 substr. W3110], gi\|173... CHEZ_ECOL5 - Protein phosphatase CheZ OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=cheZ PE=3 SV=1 CHEZ_ECOLI - Chemotaxis protein cheZ - Escherichia coli gi\|253973842, gi... - gi\|254161941\|ref\|YP_003045049.1\| chemotaxis regulator, protein phosphatase for CheY [Escherichia col... CHEZ_ECOBD - Protein phosphatase CheZ OS=Escherichia coli (strain B / BL21-DE3) GN=cheZ PE=2 SV=1 gi\|251785329, gi... - gi\|251785329\|ref\|YP_002999633.1\| hypothetical protein B21_01841 [Escherichia coli BL21], gi\|24237760... gi\|238860143, gi... - gi\|238901096\|ref\|YP_002926892.1\| chemotaxis regulator, protein phosphatase for CheY [Escherichia col... gi\|170019774, gi... - gi\|170019774\|ref\|YP_001724728.1\| chemotaxis regulator CheZ [Escherichia coli ATCC 8739], gi\|16975470... gi\|227885691, gi... - gi\|227885691\|ref\|ZP_04003496.1\| chemotaxis phosphatase CheZ [Escherichia coli 83972], gi\|227837264\|g... gi\|170081537, gi... - gi\|170081537\|ref\|YP_001730857.1\| chemotaxis regulator, protein phosphatase for CheY [Escherichia col... CHEZ_ECOL6 - Protein phosphatase CheZ OS=Escherichia coli O6 GN=cheZ PE=3 SV=1 gi\|170518530, gi... - gi\|170680812\|ref\|YP_001743361.1\| chemotaxis phosphatase CheZ [Escherichia coli SMS-3-5], gi\|17051853... EG10151 - chemotaxis regulator, protein phosphatase for CheY / CheY-P phosphatase gi\|194434123, gi... - gi\|194434123\|ref\|ZP_03066392.1\| chemotaxis phosphatase CheZ [Shigella dysenteriae 1012], gi\|19441766... gi\|215265165, gi... - gi\|215487093\|ref\|YP_002329524.1\| chemotaxis regulator CheZ [Escherichia coli O127:H6 str. E2348/69],... gi\|218554469, gi... - gi\|218554469\|ref\|YP_002387382.1\| chemotaxis regulator CheZ [Escherichia coli IAI1], gi\|218361237\|emb... gi\|218365514, gi... - gi\|218558745\|ref\|YP_002391658.1\| chemotaxis regulator CheZ [Escherichia coli S88], gi\|218365514\|emb\|... gi\|218689878, gi... - gi\|218689878\|ref\|YP_002398090.1\| chemotaxis regulator CheZ [Escherichia coli ED1a], gi\|218427442\|emb... CHEZ_ECOL6 - Protein phosphatase CheZ OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=cheZ PE=3... gi\|162138424 - gi\|162138424\|ref\|YP_541092.2\| chemotaxis regulator CheZ [Escherichia coli UTI89]	4.0E-73	[1..214]	[1..214]
gi\|77960285 - gi\|77960285\|ref\|ZP_00824164.1\| COG3143: Chemotaxis protein [Yersinia mollaretii ATCC 43969]	5.0E-73	[1..214]	[1..214]

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Predicted Domain #1

Region A:
Residues: [1-214]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMQPSIKPAD EGSAGDIIAR IGSLTRMLRD SLRELGLDQA IAEAAEAIPD ARDRLDYVVQ  60
   61 MTAQAAERAL NSVEASQPHQ DAMEKEAKAL TQRWDEWFDN PIELSDAREL VTDTRQFLRD 120
  121 VPGHTSFTNA QLLDIMMAQD FQDLTGQVIK RMMDVIQEIE RQLLMVLLEN IPEQSARPKR 180
  181 ENESLLNGPQ VDTSKAGVVA SQEQVDDLLD SLGF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	74.30103
Match:	1kmiZ
Description:	Chemotaxis phosphatase CheZ
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits