YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|213865087
Organism:	Salmonella enterica subsp. enterica serovar Typhi str. M223
Length:	445 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|213865087.

Description	E-value	Query Range	Subject Range
GLMM_PSEP1 - Phosphoglucosamine mutase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=glmM PE=3 SV=1	0.0	[3..445]	[2..444]
GLMM_PSEPK - Phosphoglucosamine mutase OS=Pseudomonas putida (strain KT2440) GN=glmM PE=3 SV=1	0.0	[3..445]	[2..444]
GLMM_ECO55 - Phosphoglucosamine mutase OS=Escherichia coli (strain 55989 / EAEC) GN=glmM PE=3 SV=1 gi\|75239257, gi\|... - gi\|75239257\|ref\|ZP_00723228.1\| COG1109: Phosphomannomutase [Escherichia coli E110019], gi\|193067499\|...	0.0	[1..445]	[1..445]
GLMM_PSEE4 - Phosphoglucosamine mutase OS=Pseudomonas entomophila (strain L48) GN=glmM PE=3 SV=1 gi\|95109010 - gi\|95109010\|emb\|CAK13706.1\| phosphoglucosamine mutase [Pseudomonas entomophila L48]	0.0	[3..445]	[2..444]
GLMM_SALCH - Phosphoglucosamine mutase OS=Salmonella choleraesuis (strain SC-B67) GN=glmM PE=3 SV=1 GLMM_SALCH - Phosphoglucosamine mutase OS=Salmonella choleraesuis GN=glmM PE=3 SV=1 GLMM_SALPC - Phosphoglucosamine mutase OS=Salmonella paratyphi C (strain RKS4594) GN=glmM PE=3 SV=1 GLMM_SALCH - Phosphoglucosamine mutase OS=Salmonella choleraesuis GN=glmM PE=3 SV=1	0.0	[1..445]	[1..445]
GLMM_ECOSE - Phosphoglucosamine mutase OS=Escherichia coli (strain SE11) GN=glmM PE=3 SV=1 GLMM_ECODH - Phosphoglucosamine mutase OS=Escherichia coli (strain K12 / DH10B) GN=glmM PE=3 SV=1 GLMM_ECO8A - Phosphoglucosamine mutase OS=Escherichia coli O8 (strain IAI1) GN=glmM PE=3 SV=1 gi\|73671320\|gb\|A... - GlmM [Escherichia coli] EG11553 - phosphoglucosamine mutase / Phosphoglucosamine mutase; UDP-GlcNAc pathway, peptidoglycan, lipopolysa... GLMM_ECOBW - Phosphoglucosamine mutase OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=glmM PE=3 SV=1 gi\|242378719, gi... - gi\|251786446\|ref\|YP_003000750.1\| hypothetical protein B21_02992 [Escherichia coli BL21], gi\|24237871... gi\|253323034, gi... - gi\|254289868\|ref\|YP_003055616.1\| phosphoglucosamine mutase [Escherichia coli BL21(DE3)], gi\|25397917... gi\|254038341, gi... - gi\|254038341\|ref\|ZP_04872399.1\| phosphoglucosamine mutase [Escherichia sp. 1_1_43], gi\|226839965\|gb\|... gi\|253975019, gi... - gi\|254163118\|ref\|YP_003046226.1\| phosphoglucosamine mutase [Escherichia coli B str. REL606], gi\|2539... gi\|124502022, gi... - gi\|124525918\|ref\|ZP_01697923.1\| phosphoglucosamine mutase [Escherichia coli B], gi\|124502022\|gb\|EAY4... gi\|89109939, gi\|... - gi\|89109939\|ref\|AP_003719.1\| phosphoglucosamine mutase [Escherichia coli str. K-12 substr. W3110], g... gi\|75260104, gi\|... - gi\|75260104\|ref\|ZP_00731382.1\| COG1109: Phosphomannomutase [Escherichia coli E22], gi\|193062105\|ref\|... gi\|191168039, gi... - gi\|75228767\|ref\|ZP_00715376.1\| COG1109: Phosphomannomutase [Escherichia coli B7A], gi\|191168039\|ref\|... gi\|194430228, gi... - gi\|75208500\|ref\|ZP_00708820.1\| COG1109: Phosphomannomutase [Escherichia coli B171], gi\|194430228\|ref... GLMM_ECOLC - Phosphoglucosamine mutase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=glmM PE=3 SV... EG11553 - phosphoglucosamine mutase / Phosphoglucosamine mutase; UDP-GlcNAc pathway, peptidoglycan, lipopolysa... GLMM_ECOLI - Phosphoglucosamine mutase (EC 5.4.2.10) - Escherichia coli gi\|30042773, gi\|... - gi\|30064514\|ref\|NP_838685.1\| phosphoglucosamine mutase [Shigella flexneri 2a str. 2457T], gi\|3004277... GLMM_ECOHS - Phosphoglucosamine mutase OS=Escherichia coli O9:H4 (strain HS) GN=glmM PE=3 SV=1 GLMM_ECO24 - Phosphoglucosamine mutase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=glmM PE=3 SV=1 GLMM_SHIB3 - Phosphoglucosamine mutase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=glmM PE=3 S... gi\|194438765, gi... - gi\|83585815\|ref\|ZP_00924456.1\| COG1109: Phosphomannomutase [Escherichia coli 101-1], gi\|194438765\|re...	0.0	[1..445]	[1..445]
GLMM_PSEU2 - Phosphoglucosamine mutase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=glmM PE=3 SV=1 GLMM_PSESY - (P95575) Phosphoglucosamine mutase (EC 5.4.2.10)	0.0	[1..445]	[1..445]
GLMM_ECO57 - Phosphoglucosamine mutase OS=Escherichia coli O157:H7 GN=glmM PE=3 SV=1 gi\|209758282, gi... - pir\|\|B85981 hypothetical protein mrsA [imported] - Escherichia coli (strain O157:H7, substrain EDL9... gi\|254795125, gi... - gi\|254795125\|ref\|YP_003079962.1\| phosphoglucosamine mutase [Escherichia coli O157:H7 str. TW14359], ... gi\|12517788, gi\|... - gi\|15803716\|ref\|NP_289750.1\| phosphoglucosamine mutase [Escherichia coli O157:H7 EDL933], gi\|1251778... gi\|208821515, gi... - gi\|208821515\|ref\|ZP_03261835.1\| phosphoglucosamine mutase [Escherichia coli O157:H7 str. EC4042], gi... gi\|208733446, gi... - gi\|208812169\|ref\|ZP_03253498.1\| phosphoglucosamine mutase [Escherichia coli O157:H7 str. EC4045], gi... gi\|15833309, gi\|... - gi\|15833309\|ref\|NP_312082.1\| phosphoglucosamine mutase [Escherichia coli O157:H7 str. Sakai], gi\|133... gi\|217327689, gi... - gi\|217327689\|ref\|ZP_03443772.1\| phosphoglucosamine mutase [Escherichia coli O157:H7 str. TW14588], g... GLMM_ECO5E - Phosphoglucosamine mutase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=glmM PE=3 SV=1 gi\|189379724, gi... - gi\|189379724\|gb\|EDU98140.1\| phosphoglucosamine mutase [Escherichia coli O157:H7 str. EC508], gi\|1687... gi\|168786060, gi... - gi\|189373813\|gb\|EDU92229.1\| phosphoglucosamine mutase [Escherichia coli O157:H7 str. EC869], gi\|1687... gi\|208806052, gi... - gi\|208806052\|ref\|ZP_03248389.1\| phosphoglucosamine mutase [Escherichia coli O157:H7 str. EC4206], gi... gi\|195938395 - gi\|195938395\|ref\|ZP_03083777.1\| phosphoglucosamine mutase [Escherichia coli O157:H7 str. EC4024] gi\|189361423, gi... - gi\|189361423\|gb\|EDU79842.1\| phosphoglucosamine mutase [Escherichia coli O157:H7 str. EC4486], gi\|168... gi\|189367579, gi... - gi\|189367579\|gb\|EDU85995.1\| phosphoglucosamine mutase [Escherichia coli O157:H7 str. EC4501], gi\|168... gi\|189001029, gi... - gi\|189001029\|gb\|EDU70015.1\| phosphoglucosamine mutase [Escherichia coli O157:H7 str. EC4076], gi\|168... gi\|168773158, gi... - gi\|187770844\|gb\|EDU34688.1\| phosphoglucosamine mutase [Escherichia coli O157:H7 str. EC4196], gi\|168... gi\|168754156, gi... - gi\|189358449\|gb\|EDU76868.1\| phosphoglucosamine mutase [Escherichia coli O157:H7 str. EC4401], gi\|168... gi\|188016364, gi... - gi\|188016364\|gb\|EDU54486.1\| phosphoglucosamine mutase [Escherichia coli O157:H7 str. EC4113], gi\|168...	0.0	[1..445]	[1..445]
GLMM_SHIF8 - Phosphoglucosamine mutase OS=Shigella flexneri serotype 5b (strain 8401) GN=glmM PE=3 SV=1	0.0	[1..445]	[1..445]
GLMM_ECOL5 - Phosphoglucosamine mutase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=glmM PE=3 SV=1 gi\|226899113, gi... - gi\|237706073\|ref\|ZP_04536554.1\| mrsA [Escherichia sp. 3_2_53FAA], gi\|226899113\|gb\|EEH85372.1\| mrsA [... gi\|190907520, gi... - gi\|75240801\|ref\|ZP_00724699.1\| COG1109: Phosphomannomutase [Escherichia coli F11], gi\|191172210\|ref\|... GLMM_ECOUT - Phosphoglucosamine mutase OS=Escherichia coli (strain UTI89 / UPEC) GN=glmM PE=3 SV=1 gi\|209758284, gi... - gi\|209758284\|gb\|ACI77454.1\| putative phosphoglucomutase / phosphomannomutase [Escherichia coli], gi\|... sp\|B7UJ69\|GLMM_ECO27 - Phosphoglucosamine mutase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=glmM PE=3 SV=1 GLMM_ECOL6 - Phosphoglucosamine mutase OS=Escherichia coli O6 GN=glmM PE=3 SV=1 GLMM_SHISS - Phosphoglucosamine mutase OS=Shigella sonnei (strain Ss046) GN=glmM PE=3 SV=1 GLMM_ECOK1 - Phosphoglucosamine mutase OS=Escherichia coli O1:K1 / APEC GN=glmM PE=3 SV=1 GLMM_ECOLU - Phosphoglucosamine mutase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=glmM PE=3 SV=1 GLMM_ECO45 - Phosphoglucosamine mutase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=glmM PE=3 SV=1 GLMM_ECOL6 - Phosphoglucosamine mutase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=glmM PE=... GLMM_ECOSM - Phosphoglucosamine mutase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=glmM PE=3 SV=1 GLMM_ECO27 - Phosphoglucosamine mutase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=glmM PE=3 SV=1 gi\|194433729, gi... - gi\|194433729\|ref\|ZP_03066004.1\| phosphoglucosamine mutase [Shigella dysenteriae 1012], gi\|194417992\|... gi\|227835293, gi... - gi\|227887897\|ref\|ZP_04005702.1\| phosphoglucosamine mutase [Escherichia coli 83972], gi\|227835293\|gb\|...	0.0	[1..445]	[1..445]

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Predicted Domain #1

Region A:
Residues: [1-445]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNRKYFGTD GIRGRVGNAP ITPDFVLKLG WAAGKVLARH GSRKIIIGKD TRISGYMLES  60
   61 ALEAGLAAAG LSASFTGPMP TPAVAYLTRT FRAEAGIVIS ASHNPFYDNG IKFFSIDGTK 120
  121 LPDDVEEAIE AEMEKEITCV DSAELGKASR IVDAAGRYIE FCKGTFPNEL SLNGLKVVVD 180
  181 CANGATYHIA PNVLRELGAT VIAIGCEPNG VNINEEVGAT DVRALQARVL AEKADLGIAL 240
  241 DGDGDRVIMV DHEGNKVDGD QIMYIIAREG LRQGQLRGGA VGTLMSNMGL ELALKQLGIP 300
  301 FARAKVGDRY VLEKLQEKGW RIGAENSGHV ILLDKTTTGD GIVAGLQVLA AMVRNHMSLH 360
  361 DLCSGMKMFP QILVNVRYTA GSGDPLENEA VKAVTADVEA TLGNRGRVLL RKSGTEPLIR 420
  421 VMVEGEDEAQ VTAFAHRIAD AVKAV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	114.0
Match:	1wqaA
Description:	Crystal Structure of Pyrococcus horikoshii phosphomannomutase/phosphoglucomutase complexed with Mg2+
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits