| Protein: | gi|190407476 |
| Organism: | Saccharomyces cerevisiae RM11-1a |
| Length: | 318 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190407476.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..301] | [1..301] |
|
|
6.0E-4 | [83..222] | [488..619] |
|
Region A: Residues: [1-66] |
1 11 21 31 41 51
| | | | | |
1 MGKGAAKYGF KSGVFPTTRS ILKSPTTKQT DIINKVKSPK PKGVLGIGYA KGVKHPKGSH 60
61 RLSPKV
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.303 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.312 | a.39.1 | EF-hand |
| View | Download | 0.483 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.283 | a.65.1 | Annexin |
| View | Download | 0.289 | a.49.1 | C-terminal domain of B transposition protein |
| View | Download | 0.280 | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.262 | a.49.1 | C-terminal domain of B transposition protein |
| View | Download | 0.262 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.256 | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.250 | a.4.1 | Homeodomain-like |
| View | Download | 0.228 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.226 | a.65.1 | Annexin |
| View | Download | 0.205 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.204 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.201 | f.13.1 | Family A G protein-coupled receptor-like |
|
Region A: Residues: [67-224] |
1 11 21 31 41 51
| | | | | |
1 NFIDVDNLIA KTVAEPQSIK SSNGSAQKVR LQKAELRRKF LIEAFRKEEA RLLHKHEYLQ 60
61 KRTKELEKAK ELELEKLNKE KSSDLTIMTL DKMMSQPLLR NRSPEESELL KLKRNYNRSL 120
121 LNFQAHKKKL NELLNLYHVA NEFIVTESQL LKKIDKVF
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.227 | 0.078 | structural constituent of ribosome | a.1.1 | Globin-like |
| View | Download | 0.275 | 0.070 | structural constituent of ribosome | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.260 | 0.013 | structural constituent of ribosome | a.74.1 | Cyclin-like |
| View | Download | 0.383 | 0.011 | structural constituent of ribosome | a.47.2 | t-snare proteins |
| View | Download | 0.276 | 0.001 | structural constituent of ribosome | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.219 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.218 | N/A | N/A | a.167.1 | Porin chaperone SurA, peptide-binding domain |
| View | Download | 0.211 | N/A | N/A | c.43.1 | CoA-dependent acyltransferases |
| View | Download | 0.202 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
|
Region A: Residues: [225-318] |
1 11 21 31 41 51
| | | | | |
1 NDETEEFTDA YDVTSNFTQF GNRKLLLSGN TTLQTQINNA IMGSLSNEKF FDISLVDSYL 60
61 NKDLKNISNK IDSKLNPTSN GAGNNGNNNN TTNL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.704 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.720 | a.77.1 | DEATH domain |
| View | Download | 0.530 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.671 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.508 | a.77.1 | DEATH domain |
| View | Download | 0.503 | a.2.3 | Chaperone J-domain |
| View | Download | 0.485 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.457 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.446 | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.443 | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.432 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.429 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.407 | a.26.1 | 4-helical cytokines |
| View | Download | 0.382 | a.4.1 | Homeodomain-like |
| View | Download | 0.370 | b.40.2 | Bacterial enterotoxins |
| View | Download | 0.363 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.343 | d.137.1 | Monooxygenase (hydroxylase) regulatory protein |
| View | Download | 0.338 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.335 | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.331 | b.78.1 | alpha-D-mannose-specific plant lectins |
| View | Download | 0.324 | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.321 | d.58.10 | Acylphosphatase-like |
| View | Download | 0.309 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.307 | a.60.8 | HRDC-like |
| View | Download | 0.304 | b.55.1 | PH domain-like |
| View | Download | 0.298 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.293 | c.15.1 | BRCT domain |
| View | Download | 0.284 | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.270 | d.199.1 | DNA-binding C-terminal domain of the transcription factor MotA |
| View | Download | 0.262 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.259 | a.39.1 | EF-hand |
| View | Download | 0.249 | a.64.1 | Saposin |
| View | Download | 0.242 | a.64.1 | Saposin |
| View | Download | 0.229 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.226 | a.118.8 | TPR-like |
| View | Download | 0.225 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.224 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.213 | c.47.1 | Thioredoxin-like |
| View | Download | 0.211 | a.1.1 | Globin-like |
| View | Download | 0.207 | a.21.1 | HMG-box |
| View | Download | 0.206 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.206 | d.2.1 | Lysozyme-like |
| View | Download | 0.204 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.203 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.202 | a.26.1 | 4-helical cytokines |
