| Protein: | gi|182887781, gi... |
| Organism: | synthetic construct |
| Length: | 896 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|182887781, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..896] | [7..902] |
|
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0.0 | [1..896] | [1..896] |
|
|
0.0 | [1..896] | [1..880] |
|
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0.0 | [1..896] | [1..900] |
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0.0 | [1..896] | [39..932] |
|
|
0.0 | [1..888] | [1..885] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MNYVGQLAGQ VIVTVKELYK GINQATLSGC IDVIVVQQQD GSYQCSPFHV RFGKLGVLRS 60
61 KEKVIDIEIN GSAVDLHMKL GDNGEAFFVE ETEEEYEKLP AYL
|
| Detection Method: |  |
| Confidence: | 81.031517 |
| Match: | PF04571.5 |
| Description: | No description for PF04571.5 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.892 | 0.000 | nucleus | b.101.1 | Ribonuclease domain of colicin E3 |
|
Region A: Residues: [104-301] |
1 11 21 31 41 51
| | | | | |
1 ATSPIPTEDQ FFKDIDTPLV KSGGDETPSQ SSDISHVLET ETIFTPSSVK KKKRRRKKYK 60
61 QDSKKEEQAA SAAAEDTCDV GVSSDDDKGA QAARGSSNAS LKEEECKEPL LFHSGDHYPL 120
121 SDGDWSPLET TYPQTACPKS DSELEVKPAE SLLRSESHME WTWGGFPEST KVSKRERSDH 180
181 HPRTATITPS ENTHFRVI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [302-395] |
1 11 21 31 41 51
| | | | | |
1 PSEDNLISEV EKDASMEDTV CTIVKPKPRA LGTQMSDPTS VAELLEPPLE STQISSMLDA 60
61 DHLPNAALAE APSESKPAAK VDSPSKKKGV HKRS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [396-491] |
1 11 21 31 41 51
| | | | | |
1 QHQGPDDIYL DDLKGLEPEV AALYFPKSES EPGSRQWPES DTLSGSQSPQ SVGSAAADSG 60
61 TECLSDSAMD LPDVTLSLCG GLSENGEISK EKFMEH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [492-896] |
1 11 21 31 41 51
| | | | | |
1 IITYHEFAEN PGLIDNPNLV IRIYNRYYNW ALAAPMILSL QVFQKSLPKA TVESWVKDKM 60
61 PKKSGRWWFW RKRESMTKQL PESKEGKSEA PPASDLPSSS KEPAGARPAE NDSSSDEGSQ 120
121 ELEESITVDP IPTEPLSHGS TTSYKKSLRL SSDQIAKLKL HDGPNDVVFS ITTQYQGTCR 180
181 CAGTIYLWNW NDKIIISDID GTITKSDALG QILPQLGKDW THQGIAKLYH SINENGYKFL 240
241 YCSARAIGMA DMTRGYLHWV NDKGTILPRG PLMLSPSSLF SAFHREVIEK KPEKFKIECL 300
301 NDIKNLFAPS KQPFYAAFGN RPNDVYAYTQ VGVPDCRIFT VNPKGELIQE RTKGNKSSYH 360
361 RLSELVEHVF PLLSKEQNSA FPCPEFSSFC YWRDPIPEVD LDDLS
|
| Detection Method: | |
| Confidence: | 1.43 |
| Match: | 1ltqA |
| Description: | Polynucleotide kinase, phosphatase domain; Polynucleotide kinase, kinase domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.672946887581151 | bayes_pls_golite062009 |
| hydrolase activity | 0.63723175386799 | bayes_pls_golite062009 |
