YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|221323736
Organism:	Bacillus subtilis subsp. subtilis str. SMY
Length:	194 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221323736.

Description	E-value	Query Range	Subject Range
gi\|225788919, gi... - gi\|225863453\|ref\|YP_002748831.1\| putative negative regulator of competence MecA [Bacillus cereus 03B... gi\|227815663, gi... - gi\|227815663\|ref\|YP_002815672.1\| putative negative regulator of competence MecA [Bacillus anthracis ... gi\|228932875, gi... - gi\|228932875\|ref\|ZP_04095742.1\| Adapter protein mecA 2 [Bacillus thuringiensis serovar andalousiensi... gi\|228814424, gi... - gi\|228945189\|ref\|ZP_04107545.1\| Adapter protein mecA 2 [Bacillus thuringiensis serovar monterrey BGS... gi\|228984668, gi... - gi\|228984668\|ref\|ZP_04144841.1\| Adapter protein mecA 2 [Bacillus thuringiensis serovar tochigiensis ... gi\|228692817, gi... - gi\|229090550\|ref\|ZP_04221786.1\| Adapter protein mecA 2 [Bacillus cereus Rock3-42], gi\|228692817\|gb\|E... gi\|228645175, gi... - gi\|229138283\|ref\|ZP_04266878.1\| Adapter protein mecA 2 [Bacillus cereus BDRD-ST26], gi\|228645175\|gb\|... gi\|47501933, gi\|... - gi\|47526785\|ref\|YP_018134.1\| adaptor protein [Bacillus anthracis str. 'Ames Ancestor'], gi\|47501933\|... gi\|228628283, gi... - gi\|229155156\|ref\|ZP_04283268.1\| Adapter protein mecA 2 [Bacillus cereus ATCC 4342], gi\|228628283\|gb\|... gi\|42780690, gi\|... - gi\|42780690\|ref\|NP_977937.1\| adaptor protein [Bacillus cereus ATCC 10987], gi\|42736610\|gb\|AAS40545.1... gi\|228599633, gi... - gi\|229183784\|ref\|ZP_04311001.1\| Adapter protein mecA 2 [Bacillus cereus BGSC 6E1], gi\|228599633\|gb\|E... gi\|30255438, gi\|... - gi\|30261584\|ref\|NP_843961.1\| adaptor protein [Bacillus anthracis str. Ames], gi\|30255438\|gb\|AAP25447... gi\|228587687, gi... - gi\|229195790\|ref\|ZP_04322550.1\| Adapter protein mecA 2 [Bacillus cereus m1293], gi\|228587687\|gb\|EEK4... gi\|21399407, gi\|... - gi\|65318856\|ref\|ZP_00391815.1\| COG4862: Negative regulator of genetic competence, sporulation and mo... gi\|229600938, gi... - gi\|229600938\|ref\|YP_002865994.1\| putative negative regulator of competence MecA [Bacillus anthracis ... gi\|254682229 - gi\|254682229\|ref\|ZP_05146091.1\| adaptor protein [Bacillus anthracis str. CNEVA-9066] gi\|254720845 - gi\|254720845\|ref\|ZP_05182636.1\| adaptor protein [Bacillus anthracis str. A1055] gi\|49479961, gi\|... - gi\|49479961\|ref\|YP_035706.1\| adaptor protein [Bacillus thuringiensis serovar konkukian str. 97-27], ... gi\|254733545 - gi\|254733545\|ref\|ZP_05191266.1\| adaptor protein [Bacillus anthracis str. Western North America USA61... gi\|49184417, gi\|... - gi\|49184417\|ref\|YP_027669.1\| adaptor protein [Bacillus anthracis str. Sterne], gi\|49178344\|gb\|AAT537... gi\|254740836 - gi\|254740836\|ref\|ZP_05198524.1\| adaptor protein [Bacillus anthracis str. Kruger B] gi\|254755074 - gi\|254755074\|ref\|ZP_05207108.1\| adaptor protein [Bacillus anthracis str. Vollum] gi\|118416270, gi... - gi\|118477045\|ref\|YP_894196.1\| adaptor protein [Bacillus thuringiensis str. Al Hakam], gi\|118416270\|g... gi\|254759611 - gi\|254759611\|ref\|ZP_05211635.1\| adaptor protein [Bacillus anthracis str. Australia 94] gi\|167639068, gi... - gi\|167639068\|ref\|ZP_02397341.1\| putative negative regulator of competence MecA [Bacillus anthracis s... gi\|165869504, gi... - gi\|165869504\|ref\|ZP_02214163.1\| putative negative regulator of competence MecA [Bacillus anthracis s... gi\|170706490, gi... - gi\|170706490\|ref\|ZP_02896950.1\| putative negative regulator of competence MecA [Bacillus anthracis s... gi\|170686026, gi... - gi\|170686026\|ref\|ZP_02877248.1\| putative negative regulator of competence MecA [Bacillus anthracis s... gi\|196033495, gi... - gi\|196033495\|ref\|ZP_03100907.1\| putative negative regulator of competence MecA [Bacillus cereus W], ... MECA2_BACAN - Adapter protein MecA 2 OS=Bacillus anthracis GN=mecA2 PE=3 SV=1 gi\|172083606, gi... - gi\|177650462\|ref\|ZP_02933429.1\| putative negative regulator of competence MecA [Bacillus anthracis s... gi\|196046578, gi... - gi\|196046578\|ref\|ZP_03113802.1\| putative negative regulator of competence MecA [Bacillus cereus 03BB... gi\|196030126, gi... - gi\|196038981\|ref\|ZP_03106288.1\| putative negative regulator of competence MecA [Bacillus cereus NVH0... gi\|218902701, gi... - gi\|218902701\|ref\|YP_002450535.1\| putative negative regulator of competence MecA [Bacillus cereus AH8... gi\|217959065, gi... - gi\|217959065\|ref\|YP_002337613.1\| putative negative regulator of competence MecA [Bacillus cereus AH1... gi\|222095219, gi... - gi\|222095219\|ref\|YP_002529279.1\| hypothetical protein BCQ_1559 [Bacillus cereus Q1], gi\|221239277\|gb...	230.0	[0..1]	[193..1]

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Predicted Domain #1

Region A:
Residues: [1-194]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLERLNYNK IKIFLTLDDL TDRGLTKEDL WKDSFKVHQL FKDMMNEANT ELGFEANGPI  60
   61 AVEVYSLQAQ GMVVIVTKNQ DADSEDDEYD DDYIEMQVKL DESADIIYQF HSFEDIIQLS 120
  121 ESLQRIGITG GTVYHYDGQY FLSLEDLGSH TAEGVVAVLA EYGNPTTLTI YRLQEYGKLI 180
  181 MDGNAVETIQ THFS

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	103.638272
Match:	PF05389.3
Description:	No description for PF05389.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits