| Protein: | gi|190407318 |
| Organism: | Saccharomyces cerevisiae RM11-1a |
| Length: | 660 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190407318.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..660] | [1..660] |
|
Region A: Residues: [1-83] |
1 11 21 31 41 51
| | | | | |
1 MSLHISKLIE QYRSTKDNDL KYMLLRQNFK INDIEDELAP LVNELLLPVL VEEQDMEILN 60
61 LVSFQVLPDL VLSMISDPAA AQL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.414 | a.4.1 | Homeodomain-like |
| View | Download | 0.422 | a.74.1 | Cyclin-like |
| View | Download | 0.570 | a.4.2 | Methylated DNA-protein cysteine methyltransferase, C-terminal domain |
| View | Download | 0.500 | a.46.1 | Methionine synthase domain |
| View | Download | 0.403 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.397 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.394 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.393 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.362 | a.28.1 | ACP-like |
| View | Download | 0.350 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.331 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.325 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.315 | a.3.1 | Cytochrome c |
| View | Download | 0.303 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.291 | a.4.1 | Homeodomain-like |
| View | Download | 0.286 | a.130.1 | Chorismate mutase II |
| View | Download | 0.285 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.282 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.259 | a.46.1 | Methionine synthase domain |
| View | Download | 0.247 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.246 | a.46.1 | Methionine synthase domain |
| View | Download | 0.244 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.237 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.236 | a.69.2 | Ypt/Rab-GAP domain of gyp1p |
| View | Download | 0.234 | a.1.1 | Globin-like |
| View | Download | 0.227 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.220 | a.4.1 | Homeodomain-like |
| View | Download | 0.216 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.212 | a.130.1 | Chorismate mutase II |
| View | Download | 0.204 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.201 | a.4.1 | Homeodomain-like |
| View | Download | 0.201 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.201 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
|
Region A: Residues: [84-209] |
1 11 21 31 41 51
| | | | | |
1 GWVISLICDP LLNQSMIHAN RSFVLIETLR NVLQKIENSP HLDYHQPVNS SLEFISKFIV 60
61 EMKRHMCDVD AAQLSHSLSE SNMLIYIESL NLLLKFSFFS DAASPSVMVT LPFDILNDVF 120
121 TIAQDY
|
|
Region B: Residues: [329-550] |
1 11 21 31 41 51
| | | | | |
1 LSILNDSLTR TQNENDHGSD NLIDSDDGFG SDNDPEQQAY LDELVSEGYD ENMYDGDTDD 60
61 EDADDINVEK NDEATKDITE TNKILLIFSE LHYPQEERFS ELLVELQTKI AINTSLIDKI 120
121 LSKETTELPT HNGEIADLNE ILNEVKGNKP IRKNVIFCTL AHTLSLQSGS ELSVLQLSIE 180
181 VIDHLLVKNH SNNITRGEQF QLIKLILPHL KTNKSFIDTL KA
|
| Detection Method: | |
| Confidence: | 7.67 |
| Match: | 1e6vA |
| Description: | Alpha chain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [210-328] |
1 11 21 31 41 51
| | | | | |
1 SATNTNESID RITEKLLLTS TQLTHPVDLE NLCPKMKYNT LAAVSRIWYK FGPIVDKLFT 60
61 NRLLPVLFPP QMGEECNVED VLEIVHNFHP YFSIRRLKDN RPLLSDSTIS QLREGLFGM
|
| Detection Method: | |
| Confidence: | 7.67 |
| Match: | 1e6vA |
| Description: | Alpha chain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [551-660] |
1 11 21 31 41 51
| | | | | |
1 GNFTQKIDEG VTLRTMILSL LLQLFPLDYS MLGEILPTIA RYSVRDKDLG VRDLSFQLLD 60
61 QILRTYYNYL IGIDWEWYKD DFYQVLQETC IKKDINTNLL LQFPPYLPHD
|
| Detection Method: | |
| Confidence: | 8.59 |
| Match: | 1l9uD |
| Description: | DNA-directed RNA polymerase alpha(2), beta, beta-prime and omega subunits |
Matching Structure (courtesy of the PDB): |
|
