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View Structure Prediction Details

Protein: gi|190689571, gi...
Organism: synthetic construct
Length: 335 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190689571, gi....

Description E-value Query
Range
Subject
Range
gi|62897823 - gi|62897823|dbj|BAD96851.1| implantation-associated protein variant [Homo sapiens]
2.0E-97 [1..335] [1..335]
gi|76673780 - gi|76673780|ref|XP_618600.2| PREDICTED: similar to implantation-associated protein [Bos taurus]
7.0E-95 [1..335] [1..335]
IAG2_PONPY - Implantation-associated protein precursor - Pongo pygmaeus (Orangutan)
MAGT1_PONAB - Magnesium transporter protein 1 OS=Pongo abelii GN=MAGT1 PE=2 SV=1
9.0E-95 [1..335] [1..335]
gi|74007799 - gi|74007799|ref|XP_549095.2| PREDICTED: similar to implantation-associated protein isoform 1 [Canis ...
7.0E-94 [1..335] [1..335]
MAGT1_MOUSE - Magnesium transporter protein 1 OS=Mus musculus GN=Magt1 PE=1 SV=1
2.0E-93 [1..335] [1..335]
MAGT1_RAT - Magnesium transporter protein 1 OS=Rattus norvegicus GN=Magt1 PE=2 SV=2
4.0E-90 [1..335] [1..335]
MAGT1_CHICK - Magnesium transporter protein 1 OS=Gallus gallus GN=MAGT1 PE=2 SV=1
4.0E-88 [22..335] [15..328]
MAGT1_DANRE - Magnesium transporter protein 1 OS=Danio rerio GN=magt1 PE=1 SV=1
6.0E-87 [9..334] [1..327]

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Predicted Domain #1
Region A:
Residues: [1-208]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARWRFWCV SVTMVVALLI VCDVPSASAQ RKKEMVLSEK VSQLMEWTNK RPVIRMNGDK  60
   61 FRRLVKAPPR NYSVIVMFTA LQLHRQCVVC KQADEEFQIL ANSWRYSSAF TNRIFFAMVD 120
  121 FDEGSDVFQM LNMNSAPTFI NFPAKGKPKR GDTYELQVRG FSAEQIARWI ADRTDVNIRV 180
  181 IRPPNYAGPL MLGLLLAVIG GLVYLRRS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.39794
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [209-335]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NMEFLFNKTG WAFAALCFVL AMTSGQMWNH IRGPPYAHKN PHTGHVNYIH GSSQAQFVAE  60
   61 THIVLLFNGG VTLGMVLLCE AATSDMDIGK RKIMCVAGIG LVVLFFSWML SIFRSKYHGY 120
  121 PYSFLMS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 6.356547
Match: PF04756.4
Description: No description for PF04756.4 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle