| Protein: | gi|215794504 |
| Organism: | Olimarabidopsis pumila |
| Length: | 213 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215794504.
| Description | E-value | Query Range |
Subject Range |
|
|
295.0 | [0..1] | [213..1] |
|
Region A: Residues: [1-137] |
1 11 21 31 41 51
| | | | | |
1 MNSFSAFSEM FGSDYEPQGG DYCPTLATSC PKKPAGRKKF RETRHPIYRG VRQRNSGKWV 60
61 SEVREPNKKT RIWLGTFQTA EMAARAHDVA ALALRGRSAC LNFADSAWRL RIPESTCAKD 120
121 IQKAAAEAAL AFQDETC
|
| Detection Method: |  |
| Confidence: | 22.39794 |
| Match: | 1gccA |
| Description: | GCC-box binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.339357445627225 | bayes_pls_golite062009 |
|
Region A: Residues: [138-213] |
1 11 21 31 41 51
| | | | | |
1 DTTTTNHGLD MEETMVEAIY TPEQSEGAFY MDEETMFGMP TLLDNMAEGM LLPPPSVQWN 60
61 HNYDGEGDGD VSLWSY
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
