YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|207347680
Organism:	Saccharomyces cerevisiae AWRI1631
Length:	188 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|207347680.

Description	E-value	Query Range	Subject Range
gi\|151946498 - gi\|151946498\|gb\|EDN64720.1\| phosphate metabolism-related protein [Saccharomyces cerevisiae YJM789] gi\|207347680 - gi\|207347680\|gb\|EDZ73773.1\| YBR106Wp-like protein [Saccharomyces cerevisiae AWRI1631] PHO88_YEAST - Inorganic phosphate transport protein PHO88 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)... PHO88 - Probable membrane protein, involved in phosphate transport; pho88 pho86 double null mutant exhibits ... gi\|190408735 - gi\|190408735\|gb\|EDV12000.1\| inorganic phosphate transporter PHO88 [Saccharomyces cerevisiae RM11-1a]	1.0E-78	[1..188]	[1..188]
SPAC589.06c - pho88 family protein YKP6_SCHPO - Uncharacterized protein C589.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC589.0...	2.0E-68	[1..188]	[1..186]
gi\|19074964, gi\|... - gi\|19074964\|ref\|NP_586470.1\| INORGANIC PHOSPHATE TRANSPORTER [Encephalitozoon cuniculi GB-M1], gi\|19... gi\|19074964 - gi\|19074964\|ref\|NP_586470.1\| INORGANIC PHOSPHATE TRANSPORTER [Encephalitozoon cuniculi GB-M1]	1.0E-56	[4..176]	[10..176]

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Predicted Domain #1

Region A:
Residues: [1-188]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPQVSNIII MLVMMQLSRR IDMEDPTIIM YIRILYCSSI GISWIIYQMA RKRIVAKNDM  60
   61 TTMKYVEPGN AMSGEGEKLQ VTTVRDYDLK EIDSAIKSIY TGMAMMGFMH LYLKYTNPLF 120
  121 MQSISPVKSA LEHNEVKIHL FGKPATGDLK RPFKAPSLFG GMGQTGPKTD KKSIEEAERA 180
  181 GNAGVKAE

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.430	d.14.1	Ribosomal protein S5 domain 2-like
View	Download	0.400	a.26.1	4-helical cytokines
View	Download	0.327	a.26.1	4-helical cytokines
View	Download	0.316	a.26.1	4-helical cytokines
View	Download	0.307	a.24.9	alpha-catenin/vinculin

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits