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View Structure Prediction Details

Protein: gi|221323690
Organism: Bacillus subtilis subsp. subtilis str. SMY
Length: 255 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221323690.

Description E-value Query
Range
Subject
Range
gi|52786133, gi|... - gi|52786133|ref|YP_091962.1| QcrC [Bacillus licheniformis ATCC 14580], gi|52348635|gb|AAU41269.1| Qc...
219.0 [0..1] [255..1]

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Predicted Domain #1
Region A:
Residues: [1-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRGKGMKFV GDSRIPAEKK PNIPKDYSEY PGKTEAFWPN FLLKEWMVGA VFLIGFLVLT  60
   61 IVHQPPLERM ADPTDTGYIP LPDWYFLFLY QLLKYEYAAG SFTVVGAMIM PGLAFGALLL 120
  121 APFLDRGTER RPWKRPVAVG MMLLAISAAV FLTWQSVATH DWAKAEEQGK ITKE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.0
Match: 1bccC
Description: Mitochondrial cytochrome b subunit, C-terminal domain; Mitochondrial cytochrome b subunit, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [175-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADIDTNAEGY KVFKEQGCIS CHGDNLQGGA AGPSLVDSGL KPDEIKKIAV EGKGKMPAGV  60
   61 FKGNDKQLEE LAKFISETTA K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.30103
Match: 2v08A
Description: No description for 2v08A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle