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View Structure Prediction Details

Protein: gi|190406161
Organism: Saccharomyces cerevisiae RM11-1a
Length: 290 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190406161.

Description E-value Query
Range
Subject
Range
USB1_YEAST - U6 snRNA phosphodiesterase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=USB1 PE=1 SV=...
gi|190406161 - gi|190406161|gb|EDV09428.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
YLR132C - Essential protein of unknown function; fluorescent protein (GFP or YFP)-tagged protein localizes to ...
0.0 [1..290] [1..290]

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Predicted Domain #1
Region A:
Residues: [1-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFISADYSS SDGSDTESES SNKSEVQIEY TEKTCIQKAD STDLPAIPDS IILKYHIPPN  60
   61 LQKYEHQDMN MSRFWRSFTY FEWRPTPAIH RQLQKIICKY KETFMKQEYT NPYQLVDFDP 120
  121 LFISHLGAPK PLHVSLTRSL LFETEEQRHV FIQEMRNGLR NNEITPFKLQ ICSYPKLYIS 180
  181 ERANTLYLGL PVSECPNKAQ ISPFKTIIAE ALQKSGISNY QDLIVSRQNL HVSIAIASNP 240
  241 SKATLKRYQQ LNETMGALLL LNNDFAYKLE FLVNSIYCDE NRHSIRIPFN 

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle