YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|221322365
Organism:	Bacillus subtilis subsp. subtilis str. SMY
Length:	408 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221322365.

Description	E-value	Query Range	Subject Range
gi\|52347360, gi\|... - gi\|52784858\|ref\|YP_090687.1\| EcsB [Bacillus licheniformis ATCC 14580], gi\|52347360\|gb\|AAU39994.1\| Ec...	305.0	[0..1]	[407..1]

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Predicted Domain #1

Region A:
Residues: [1-213]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNMLDIWQS RLQEHIKETR TYMKYMLNDH LVIVLIFFLA GAASWYSKWI RDIPAHFPSF  60
   61 WVMAVLFSLV LTSSYVRTLL KEADLVFLLP LEAKMEPYLK QAFVYSYVSQ LFPLIALSIV 120
  121 AMPLYFAVTP GASLVSYAAV FVQLLLLKAW NQVMEWRTTF QNDRSMKRMD VIIRFAANTL 180
  181 VLYFVFQSVY MYALLVYVIM AVLYLYMSSA AKR

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [214-408]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTFKWESHIE SELRRKQRFY RIANLFTDVP HLRKQAKRRA YLDFLLRLVP FEQRKTFAYM  60
   61 FTRAFLRSSD YLGILVRLTI VFALIIMYVS ASPLIAAVLT VFAIFITGIQ LLPLFGHFDH 120
  121 LALQELYPVQ KETKLKSYFS LLKTALSIQA LLMSVASAYA AGLTGFLYAL IGSAVLIFVV 180
  181 LPAYMTTRLK KHGKL