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View Structure Prediction Details

Protein: gi|207346979
Organism: Saccharomyces cerevisiae AWRI1631
Length: 294 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|207346979.

Description E-value Query
Range
Subject
Range
gi|151941926 - gi|151941926|gb|EDN60282.1| conserved protein [Saccharomyces cerevisiae YJM789]
RXT3 - Subunit of the RPD3L complex; involved in histone deacetylation
gi|207346979 - gi|207346979|gb|EDZ73308.1| YDL076Cp-like protein [Saccharomyces cerevisiae AWRI1631]
RXT3_YEAST - Transcriptional regulatory protein RXT3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=...
gi|190405083 - gi|190405083|gb|EDV08350.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
0.0 [1..294] [1..294]

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Predicted Domain #1
Region A:
Residues: [1-294]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVSEQDPNR AYRETQSQIY KLQETLLNSA RTKNKQEEGQ ESNTHSFPEQ YMHYQNGRNS  60
   61 AYDLPNVSSQ SVLAFTEKHY PNKLKNLGTL YYNRFKEGSF DEDSTSYSDR HSFPYNLYDN 120
  121 TLPPPFLPAI GIQNINNIAT LKITYEDIQA SFNNIESPRK RNNEIWGCDI YSDDSDPILV 180
  181 LRHCGFKIGA PSGGSFHKLR RTPVNVTNQD NVTGNLPLLE GTPFDLEVEL LFLPTLQKYP 240
  241 SVKRFDITSR EWGSEATVIH DGLSYGIYSI VIKQRLDRDK PHEPNGYIKN LKWT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [163-294]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NEIWGCDIYS DDSDPILVLR HCGFKIGAPS GGSFHKLRRT PVNVTNQDNV TGNLPLLEGT  60
   61 PFDLEVELLF LPTLQKYPSV KRFDITSREW GSEATVIHDG LSYGIYSIVI KQRLDRDKPH 120
  121 EPNGYIKNLK WT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.33
Match: 1jbiA
Description: Cochlin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle