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View Structure Prediction Details

Protein: GG2_ARATH
Organism: Arabidopsis thaliana
Length: 100 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GG2_ARATH.

Description E-value Query
Range
Subject
Range
GG2_ORYSI - Guanine nucleotide-binding protein subunit gamma 2 OS=Oryza sativa subsp. indica GN=RGG2 PE=2 SV=1
GG2_ORYSJ - Guanine nucleotide-binding protein subunit gamma 2 OS=Oryza sativa subsp. japonica GN=RGG2 PE=1 SV=1
149.0 [0..6] [98..50]
GG1_ARATH - Guanine nucleotide-binding protein subunit gamma 1 OS=Arabidopsis thaliana GN=GG1 PE=1 SV=1
138.0 [0..21] [100..19]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAGSSNSSG QLSGRVVDTR GKHRIQAELK RLEQEARFLE EELEQLEKMD NASASCKEFL  60
   61 DSVDSKPDPL LPETTGPVNA TWDQWFEGPK EAKRCGCSIL 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.432 a.246.1 Description not found.
View Download 0.420 a.216.1 Description not found.
View Download 0.419 a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.419 a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.417 a.2.11 Fe,Mn superoxide dismutase (SOD), N-terminal domain
View Download 0.388 a.118.11 Cytochrome c oxidase subunit E
View Download 0.334 a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.334 a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.332 a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.307 a.7.5 Tubulin chaperone cofactor A
View Download 0.259 a.231.1 Description not found.
View Download 0.246 a.278.1 Description not found.
View Download 0.228 a.7.8 GAT domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle