| Protein: | gi|190406912 |
| Organism: | Saccharomyces cerevisiae RM11-1a |
| Length: | 292 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190406912.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..292] | [1..292] |
|
|
4.0E-57 | [79..274] | [122..286] |
|
|
6.0E-51 | [79..268] | [38..196] |
|
|
6.0E-51 | [78..276] | [6..183] |
|
|
7.0E-46 | [79..267] | [24..176] |
|
|
6.0E-43 | [82..276] | [359..535] |
|
|
8.0E-40 | [120..276] | [3..145] |
|
|
4.0E-38 | [85..268] | [15..148] |
|
Region A: Residues: [1-63] |
1 11 21 31 41 51
| | | | | |
1 MTSLNIMGRK FILERAKRND NIEEIYTSAY VSLPSSTDTR LPHFKAKEED CDVYEEGTNL 60
61 VGK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.507 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.476 | a.17.1 | p8-MTCP1 |
| View | Download | 0.463 | a.4.1 | Homeodomain-like |
| View | Download | 0.448 | a.4.1 | Homeodomain-like |
| View | Download | 0.444 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.320 | a.4.1 | Homeodomain-like |
| View | Download | 0.284 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.284 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.280 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.258 | a.159.2 | FF domain |
| View | Download | 0.258 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.257 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.246 | a.60.8 | HRDC-like |
| View | Download | 0.232 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.229 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.209 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.209 | a.21.1 | HMG-box |
| View | Download | 0.207 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.204 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.202 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [64-292] |
1 11 21 31 41 51
| | | | | |
1 NAKYTYRSLG RHLDFLRPGL RFGGSQSSKY TYYTVEVKID TVNLPLYKDS RSLDPHVTGT 60
61 FTIKNLTPVL DKVVTLFEGY VINYNQFPLC SLHWPAEETL DPYMAQRESD CSHWKRFGHF 120
121 GSDNWSLTER NFGQYNHESA EFMNQRYIYL KWKERFLLDD EEQENLMLDD NHHLEGASFE 180
181 GFYYVCLDQL TGSVEGYYYH PACELFQKLE LVPTNCDALN TYSSGFEIA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
