YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|183571351, gi...
Organism:	Streptococcus pneumoniae SP195
Length:	214 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|183571351, gi....

Description	E-value	Query Range	Subject Range
gi\|23003163 - gi\|23003163\|ref\|ZP_00046831.1\| COG2039: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl p... PCP_LACGA - Pyrrolidone-carboxylate peptidase OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243 / JCM 1131... gi\|226820393 - gi\|226820393\|ref\|ZP_03809512.1\| pyrrolidone-carboxylate peptidase [Lactobacillus gasseri MV-22]	302.0	[0..1]	[214..1]
PCP_STRP1 - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M1 GN=pcp PE=3 SV=1 PCP_STRPZ - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=pcp PE=3 ... PCP_STRPM - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M28 GN=pcp PE=3 SV=1 PCP_STRPY - (Q01328) Pyrrolidone-carboxylate peptidase (EC 3.4.19.3) (5-oxoprolyl-peptidase) (Pyroglutamyl-pepti... PCP_STRP6 - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS1... gi\|15674611, gi\|... - gi\|15674611\|ref\|NP_268785.1\| pyrrolidone-carboxylate peptidase [Streptococcus pyogenes M1 GAS], gi\|1... PCP_STRPD - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=pcp PE... PCP_STRP6 - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M6 GN=pcp PE=1 SV=1 gi\|71853012, gi\|... - gi\|71910230\|ref\|YP_281780.1\| pyrrolidone-carboxylate peptidase [Streptococcus pyogenes MGAS5005], gi... PCP_STRPM - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M28 (strain MGAS6180) GN=pcp PE... gi\|56808173 - gi\|56808173\|ref\|ZP_00365954.1\| COG2039: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl p... PCP_STRPG - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=pcp PE=...	301.0	[0..1]	[214..1]
PCP_STRP3 - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M3 GN=pcp PE=3 SV=1 PCP_STRP3 - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS3... PCP_STRPQ - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M3 (strain SSI-1) GN=pcp PE=3 S...	301.0	[0..1]	[214..1]
PCP_STRPF - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=pcp PE... PCP_STRP8 - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M18 (strain MGAS8232) GN=pcp PE... PCP_STRP8 - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M18 GN=pcp PE=3 SV=1	301.0	[0..1]	[214..1]
PCP_STRPC - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=pcp PE... PCP_STRPB - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=pcp PE...	300.0	[0..1]	[214..1]
PCP2_STRPN - Pyrrolidone-carboxylate peptidase 2 OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TI... gi\|149007790, gi... - gi\|149007790\|ref\|ZP_01831386.1\| pyrrolidone-carboxylate peptidase [Streptococcus pneumoniae SP18-BS7... gi\|225855549, gi... - gi\|225855549\|ref\|YP_002737061.1\| pyroglutamyl-peptidase I [Streptococcus pneumoniae JJA], gi\|2257235... PCP2_STRPN - Pyrrolidone-carboxylate peptidase 2 OS=Streptococcus pneumoniae GN=pcp2 PE=3 SV=1 gi\|183575434, gi... - gi\|183575434\|gb\|EDT95962.1\| pyroglutamyl-peptidase I [Streptococcus pneumoniae CDC3059-06], gi\|16849... gi\|182630331, gi... - gi\|182684997\|ref\|YP_001836744.1\| pyrrolidone-carboxylate peptidase [Streptococcus pneumoniae CGSP14]... gi\|221232775, gi... - gi\|221232775\|ref\|YP_002511929.1\| putative pyrrolidone-carboxylate peptidase [Streptococcus pneumonia...	299.0	[0..1]	[214..1]
PCP_LACJO - Pyrrolidone-carboxylate peptidase OS=Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533) G... PCP_LACJO - Pyrrolidone-carboxylate peptidase OS=Lactobacillus johnsonii GN=pcp PE=3 SV=1	298.0	[0..1]	[214..1]
gi\|165868832, gi... - gi\|165868832\|ref\|ZP_02213492.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. A0488], g... gi\|167514871, gi... - gi\|167637364\|ref\|ZP_02395644.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. A0193], g... gi\|170705179, gi... - gi\|170705179\|ref\|ZP_02895644.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. A0389], g... gi\|172084061, gi... - gi\|177650109\|ref\|ZP_02933110.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. A0174], g... gi\|190564734, gi... - gi\|190564734\|ref\|ZP_03017655.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis Tsiankovskii-I... gi\|49179808, gi\|... - gi\|49185881\|ref\|YP_029133.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. Sterne], gi\|... gi\|50196941, gi\|... - gi\|50196941\|ref\|YP_052632.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. 'Ames Ancest... gi\|254760929 - gi\|254760929\|ref\|ZP_05212953.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. Australia... gi\|254752412 - gi\|254752412\|ref\|ZP_05204448.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. Vollum] gi\|254738096 - gi\|254738096\|ref\|ZP_05195799.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. Western N... PCP_BACAA - Pyrrolidone-carboxylate peptidase OS=Bacillus anthracis (strain A0248) GN=pcp PE=3 SV=1 gi\|229145672, gi... - gi\|229145672\|ref\|ZP_04274055.1\| Pyrrolidone-carboxylate peptidase [Bacillus cereus BDRD-ST24], gi\|22... gi\|228928140, gi... - gi\|228928140\|ref\|ZP_04091184.1\| Pyrrolidone-carboxylate peptidase [Bacillus thuringiensis serovar po... gi\|30257673, gi\|... - gi\|30263040\|ref\|NP_845417.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. Ames], gi\|30... gi\|228915662, gi... - gi\|228915662\|ref\|ZP_04079249.1\| Pyrrolidone-carboxylate peptidase [Bacillus thuringiensis serovar pu... gi\|65320351, gi\|... - gi\|65320351\|ref\|ZP_00393310.1\| COG2039: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl p... PCP_BACAC - Pyrrolidone-carboxylate peptidase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=pcp PE=3 SV=... gi\|206974548, gi... - gi\|206974548\|ref\|ZP_03235464.1\| pyrrolidone-carboxylate peptidase [Bacillus cereus H3081.97], gi\|206... PCP_BACC7 - Pyrrolidone-carboxylate peptidase OS=Bacillus cereus (strain AH187) GN=pcp PE=3 SV=1 PCP_BACAN - Pyrrolidone-carboxylate peptidase OS=Bacillus anthracis GN=pcp PE=1 SV=1	296.0	[0..1]	[214..1]
PCP_BACC1 - Pyrrolidone-carboxylate peptidase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=pcp PE=3 SV=1	295.0	[0..1]	[214..1]
PCP_BACHK - Pyrrolidone-carboxylate peptidase OS=Bacillus thuringiensis subsp. konkukian GN=pcp PE=3 SV=1 PCP_BACHK - Pyrrolidone-carboxylate peptidase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=pcp P...	295.0	[0..1]	[214..1]

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Predicted Domain #1

Region A:
Residues: [1-214]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILVTGFNP FGGEKINPAL EAVKLLPSEI NGAEVRWVEI PTVFYKSSEV LEAEILRYQP  60
   61 DAVLCIGQAG GRTGLTPERV AINQDDARIP DNEGNQPIDT PIRIDGASAY FSSLPIKAMV 120
  121 QAIKKQGLPA VVSNSAGTFV CNHLMYQALY LVDKKFPNMR AGFMHIPYMM EQVVNKPNTA 180
  181 GMSLCDIVRG IEVAIEAIVD YKDKDLQLVG GETH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	74.69897
Match:	1augA
Description:	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits