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View Structure Prediction Details

Protein: gi|182888423
Organism: synthetic construct
Length: 141 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|182888423.

Description E-value Query
Range		 Subject
Range
RLN2 - relaxin 2
 186.0 [0..1] [141..1]
gi|60653721 - gi|60653721|gb|AAX29554.1| relaxin 1 [synthetic construct]
 180.0 [0..1] [141..1]
RELX_MACMU - Prorelaxin OS=Macaca mulatta GN=RLN PE=3 SV=1
 175.0 [0..1] [141..1]
gi|69367 - pir||RXPG relaxin precursor - pig
RELX_PIG - Prorelaxin OS=Sus scrofa GN=RLN PE=1 SV=1
 169.0 [0..1] [141..1]
gi|11991650 - gi|11991650|gb|AAG42318.1| prorelaxin precursor [Otolemur crassicaudatus]
 161.0 [0..1] [141..1]
REL2_PANTR - Prorelaxin H2 (Fragment) OS=Pan troglodytes GN=RNL2 PE=2 SV=1
 160.0 [0..19] [141..1]
REL3_RAT - Relaxin-3 OS=Rattus norvegicus GN=Rln3 PE=2 SV=1
 158.0 [0..1] [141..1]

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Predicted Domain #1
Region A:
Residues: [1-141] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMLGLLLLA SWALLGALGL QAEARPAPYG VKLCGREFIR AVIFTCGGSR WRRADILAHE  60
   61 SLGDFFADGE ANTDHLASEL DEAVGSSEWL ALTKSPQAFY GGRASWQGSP GVVRGSRDVL 120
  121 AGLSSSCCEW GCSKSQISSL C

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.82
Match: 3lriA
Description: Insulin-like growth factor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.182470373231634 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle