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View Structure Prediction Details

Protein: gi|221319403
Organism: Bacillus subtilis subsp. subtilis str. JH642
Length: 277 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221319403.

Description E-value Query
Range
Subject
Range
gi|147676555, gi... - gi|98661989|dbj|GAA01057.1| unnamed protein product [Pelotomaculum thermopropionicum SI], gi|1476765...
451.0 [0..3] [274..7]

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Predicted Domain #1
Region A:
Residues: [1-277]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTKLDFLKM KESEEPIVML TAYDYPAAKL AEQAGVDMIL VGDSLGMVVL GLDSTVGVTV  60
   61 ADMIHHTKAV KRGAPNTFIV TDMPFMSYHL SKEDTLKNAA AIVQESGADA LKLEGGEGVF 120
  121 ESIRALTLGG IPVVSHLGLT PQSVGVLGGY KVQGKDEQSA KKLIEDSIKC EEAGAMMLVL 180
  181 ECVPAELTAK IAETLSIPVI GIGAGVKADG QVLVYHDIIG HGVERTPKFV KQYTRIDETI 240
  241 ETAISGYVQD VRHRAFPEQK HSFQMNQTVL DGLYGGK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 110.0
Match: 1m3uA
Description: Ketopantoate hydroxymethyltransferase PanB
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
3-methyl-2-oxobutanoate hydroxymethyltransferase activity 4.08693637310631 bayes_pls_golite062009
catalytic activity 2.59838799615646 bayes_pls_golite062009
hydroxymethyl-, formyl- and related transferase activity 2.05689968523792 bayes_pls_golite062009
transferase activity 1.07154136609184 bayes_pls_golite062009
glycine hydroxymethyltransferase activity 0.646649320021871 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.366715189574293 bayes_pls_golite062009
oxo-acid-lyase activity 0.0960362356555544 bayes_pls_golite062009
carbon-carbon lyase activity 0.0846611486307003 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle