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View Structure Prediction Details

Protein: gi|221318775
Organism: Bacillus subtilis subsp. subtilis str. JH642
Length: 293 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221318775.

Description E-value Query
Range
Subject
Range
EFTS_BACSK - Elongation factor Ts OS=Bacillus clausii (strain KSM-K16) GN=tsf PE=3 SV=1
387.0 [0..1] [293..1]

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Predicted Domain #1
Region A:
Residues: [1-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAITAQQVKE LREKTGAGMM DCKKALTETD GDMDKAIDLL REKGIAKAAK KADRIAAEGS  60
   61 TLIKTDGNKG VILEVNSETD FVAKNEGFKE LLNTLADHLL ANTPADVEEA MGQKMENGST 120
  121 VEEYITSAVA KIGEKITLRR FTVLTKDDSS AFGAYLHMGG RIGVLTVLNG TTDEETAKDI 180
  181 AMHVAAVNPR YISRDQVSEE ETNHERQILT QQALQEGKPE NIVAKMVEGR LNKFFEEICL 240
  241 LDQAFVKNPD EKVKQVIAAK NATVQTFVRY EVGEGIEKRQ ENFAEEVMNQ VKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 93.09691
Match: 1efuB
Description: Elongation factor Ts (EF-Ts), N-terminal domain; Elongation factor Ts (EF-Ts), dimerisation domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
translation elongation factor activity 7.23182500466043 bayes_pls_golite062009
translation regulator activity 3.96278094372195 bayes_pls_golite062009
translation factor activity, nucleic acid binding 3.9473033844258 bayes_pls_golite062009
nucleic acid binding 2.95860833728049 bayes_pls_golite062009
binding 2.78746741498712 bayes_pls_golite062009
ubiquitin binding 0.83381750627184 bayes_pls_golite062009
small conjugating protein binding 0.642417697826871 bayes_pls_golite062009
protein binding 0.259532204752794 bayes_pls_golite062009
catalytic activity 0.25774924710417 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle