YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|219932998, gi...
Organism:	Mycobacterium leprae Br4923
Length:	244 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|219932998, gi....

Description	E-value	Query Range	Subject Range
gi\|148823389, gi... - gi\|76784067\|ref\|ZP_00771254.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Mycobacteriu... gi\|148661998, gi... - gi\|167967125\|ref\|ZP_02549402.1\| 1-acylglycerol-3-phosphate o-acyltransferase [Mycobacterium tubercul... gi\|124601395, gi... - gi\|81253812\|ref\|ZP_00878344.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Mycobacteriu... gi\|197740798, gi... - gi\|254364981\|ref\|ZP_04981027.1\| 1-acylglycerol-3-phosphate o-acyltransferase [Mycobacterium tubercul... gi\|215431114 - gi\|215431114\|ref\|ZP_03429033.1\| 1-acylglycerol-3-phosphate o-acyltransferase [Mycobacterium tubercul... gi\|215446410 - gi\|215446410\|ref\|ZP_03433162.1\| 1-acylglycerol-3-phosphate o-acyltransferase [Mycobacterium tubercul... gi\|255096988 - gi\|255096988\|ref\|ZP_05326466.1\| 1-acylglycerol-3-phosphate O-acyltransferase [Mycobacterium tubercul... gi\|218753903 - gi\|218753903\|ref\|ZP_03532699.1\| 1-acylglycerol-3-phosphate o-acyltransferase [Mycobacterium tubercul... gi\|254816003 - gi\|254816003\|ref\|ZP_05221004.1\| 1-acylglycerol-3-phosphate O-acyltransferase [Mycobacterium tubercul... gi\|219558159 - gi\|219558159\|ref\|ZP_03537235.1\| 1-acylglycerol-3-phosphate o-acyltransferase [Mycobacterium tubercul... gi\|254551219 - gi\|254551219\|ref\|ZP_05141666.1\| 1-acylglycerol-3-phosphate O-acyltransferase [Mycobacterium tubercul... gi\|224990556, gi... - gi\|224990556\|ref\|YP_002645243.1\| 1-acylglycerol-3-phosphate O-acyltransferase [Mycobacterium bovis B... gi\|253320257, gi... - gi\|253798754\|ref\|YP_003031755.1\| 1-acylglycerol-3-phosphate O-acyltransferase [Mycobacterium tubercu... gi\|7477100 - pir\|\|H70936 1-acylglycerol-3-phosphate O-acyltransferase (EC 2.3.1.51) homolog Rv2182c - Mycobacteri... gi\|2911102, gi\|1... - gi\|2911102\|emb\|CAA17486.1\| 1-acylglycerol-3-phosphate O-acyltransferase [Mycobacterium tuberculosis ... gi\|31793360, gi\|... - gi\|31793360\|ref\|NP_855853.1\| 1-acylglycerol-3-phosphate O-acyltransferase [Mycobacterium bovis AF212... gi\|215403571 - gi\|215403571\|ref\|ZP_03415752.1\| 1-acylglycerol-3-phosphate o-acyltransferase [Mycobacterium tubercul... gi\|215411906 - gi\|215411906\|ref\|ZP_03420680.1\| 1-acylglycerol-3-phosphate o-acyltransferase [Mycobacterium tubercul... gi\|121493710, gi... - gi\|121638062\|ref\|YP_978286.1\| 1-acylglycerol-3-phosphate O-acyltransferase [Mycobacterium bovis BCG ... gi\|215427558 - gi\|215427558\|ref\|ZP_03425477.1\| 1-acylglycerol-3-phosphate o-acyltransferase [Mycobacterium tubercul... gi\|13881926, gi\|... - gi\|15841672\|ref\|NP_336709.1\| acyltransferase family protein [Mycobacterium tuberculosis CDC1551], gi...	207.0	[0..1]	[244..1]
gi\|41408018, gi\|... - gi\|41408018\|ref\|NP_960854.1\| hypothetical protein MAP1920c [Mycobacterium avium subsp. paratuberculo...	205.0	[0..1]	[244..1]
gi\|110817658, gi... - gi\|111018128\|ref\|YP_701100.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Rhodococcus jostii RHA...	202.0	[0..1]	[218..1]
gi\|54015188, gi\|... - gi\|54023680\|ref\|YP_117922.1\| putative 1-acylglycerol-3-phosphate O-acyltransferase [Nocardia farcini...	201.0	[0..1]	[243..1]
gi\|108770662, gi... - gi\|108800243\|ref\|YP_640440.1\| phospholipid/glycerol acyltransferase [Mycobacterium sp. MCS], gi\|1087... gi\|119869371, gi... - gi\|92915568\|ref\|ZP_01284191.1\| Phospholipid/glycerol acyltransferase [Mycobacterium sp. KMS], gi\|924... gi\|92908684, gi\|... - gi\|92908684\|ref\|ZP_01277463.1\| Phospholipid/glycerol acyltransferase [Mycobacterium sp. JLS], gi\|924...	197.0	[0..1]	[244..1]
gi\|84382933, gi\|... - gi\|84496165\|ref\|ZP_00995019.1\| hypothetical protein JNB_01560 [Janibacter sp. HTCC2649], gi\|84382933...	194.0	[0..1]	[236..1]
gi\|89338997, gi\|... - gi\|89338997\|ref\|ZP_01191762.1\| Phospholipid/glycerol acyltransferase [Mycobacterium flavescens PYR-G...	192.0	[0..1]	[244..1]
gi\|116670113, gi... - gi\|66966484\|ref\|ZP_00414043.1\| Phospholipid/glycerol acyltransferase [Arthrobacter sp. FB24], gi\|668...	191.0	[0..1]	[225..1]
gi\|119957334, gi... - gi\|90206219\|ref\|ZP_01208855.1\| Phospholipid/glycerol acyltransferase [Mycobacterium vanbaalenii PYR-...	189.0	[0..1]	[244..1]
gi\|62896372 - gi\|62896372\|emb\|CAH94396.1\| putative 1-acylglycerol-3-phosphate O-acyltransferase [Streptomyces gris...	189.0	[0..8]	[222..50]

Back

Predicted Domain #1

Region A:
Residues: [1-244]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWYWLFKYIF MGPALSVLGR PKVEGLEYVP SSGPAILASN HLAVADSFYL PLVVRRRITF  60
   61 LAKSEYFTGT GLKGWFTSWF YRATGQVPID RTDADTAEAA LNTAERLLGH GKLIGMYPEG 120
  121 TRSPDGRLYK GKTGVARLTL QTGVPVIPVA MIGTNVVNPP GSKMWRFGRV TVRFGKPMDF 180
  181 SRFEGAAGNR VIERVITDEV IYELMELSGQ EYVDIYAASV KGHSSSSGAK LTNEAVRIPD 240
  241 TAVG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	17.09691
Match:	1iuqA
Description:	The 1.55 A Crystal Structure of Glycerol-3-Phosphate Acyltransferase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits