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View Structure Prediction Details

Protein: gi|221317070
Organism: Bacillus subtilis subsp. subtilis str. JH642
Length: 638 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221317070.

Description E-value Query
Range
Subject
Range
gi|52078497, gi|... - gi|52078497|ref|YP_077288.1| DNA gyrase subunit B [Bacillus licheniformis ATCC 14580], gi|52001708|g...
856.0 [0..1] [638..3]

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Predicted Domain #1
Region A:
Residues: [1-373]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQQQNSYDE NQIQVLEGLE AVRKRPGMYI GSTNSKGLHH LVWEIVDNSI DEALAGYCTD  60
   61 INIQIEKDNS ITVVDNGRGI PVGIHEKMGR PAVEVIMTVL HAGGKFDGSG YKVSGGLHGV 120
  121 GASVVNALST ELDVTVHRDG KIHRQTYKRG VPVTDLEIIG ETDHTGTTTH FVPDPEIFSE 180
  181 TTEYDYDLLA NRVRELAFLT KGVNITIEDK REGQERKNEY HYEGGIKSYV EYLNRSKEVV 240
  241 HEEPIYIEGE KDGITVEVAL QYNDSYTSNI YSFTNNINTY EGGTHEAGFK TGLTRVINDY 300
  301 ARKKGLIKEN DPNLSGDDVR EGLTAIISIK HPDPQFEGQT KTKLGNSEAR TITDTLFSTA 360
  361 METFMLENPD AAK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 147.0
Match: 1ei1A
Description: DNA gyrase B
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [374-638]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KIVDKGLMAA RARMAAKKAR ELTRRKSALE ISNLPGKLAD CSSKDPSISE LYIVEGDSAG  60
   61 GSAKQGRDRH FQAILPLRGK ILNVEKARLD KILSNNEVRS MITALGTGIG EDFNLEKARY 120
  121 HKVVIMTDAD VDGAHIRTLL LTFFYRYMRQ IIENGYVYIA QPPLYKVQQG KRVEYAYNDK 180
  181 ELEELLKTLP QTPKPGLQRY KGLGEMNATQ LWETTMDPSS RTLLQVTLED AMDADETFEM 240
  241 LMGDKVEPRR NFIEANARYV KNLDI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.09691
Match: 1bgwA
Description: TOPOISOMERASE RESIDUES 410-1202,
Matching Structure (courtesy of the PDB):

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