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View Structure Prediction Details

Protein: gi|194131180, gi...
Organism: Drosophila sechellia
Length: 350 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|194131180, gi....

Description E-value Query
Range
Subject
Range
gi|195163936, gi... - gi|195163936|ref|XP_002022805.1| GL14761 [Drosophila persimilis], gi|194104828|gb|EDW26871.1| GL1476...
gi|54643481, gi|... - gi|54643481|gb|EAL32225.1| GA15530 [Drosophila pseudoobscura pseudoobscura], gi|125982805|ref|XP_001...
gi|54643481|gb|E... - GA15530-PA [Drosophila pseudoobscura], GA15530 [Drosophila pseudoobscura pseudoobscura]
456.0 [0..1] [350..1]

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Predicted Domain #1
Region A:
Residues: [1-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSSGFMFNI DNGYLEGLCR GFKCGILKQA DYLNLVQCET LEDLKLHLQG TDYGSFLANE  60
   61 PSPLSVSVID DKLREKLVIE FQHMRNHAVE PLSNFLDFIT YGYMIDNIIL LITGTLHQRP 120
  121 ISELIPKCHP LGSFEQMEAI HVASTPAELY NAVLVDTPLA PFFVDCISEQ DLDEMNIEII 180
  181 RNTLYKAYLE AFYNFCKNMG GATADVMCEI LAFEADRRAI IITINSFGTE LSKDDRAKLY 240
  241 PNCGKMYPDG LAALARADDY EQVKTVAEYY AEYAALFDGS GNNPGDKTLE DKFFEHEVKL 300
  301 DVYAFLQQFH FGVFYAYLKL KEQECRNIVW IAECVAQKHR AKIDNYIPIF 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.69897
Match: 1r5zA
Description: Crystal Structure of Subunit C of V-ATPase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle