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View Structure Prediction Details

Protein: gi|221312529
Organism: Bacillus subtilis subsp. subtilis str. NCIB 3610
Length: 287 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221312529.

Description E-value Query
Range
Subject
Range
gi|60468186 - gi|60468186|gb|EAL66196.1| hypothetical protein DDB0204910 [Dictyostelium discoideum]
gi|66812030, gi|... - gi|66812030|ref|XP_640194.1| hypothetical protein [Dictyostelium discoideum AX4], gi|60468186|gb|EAL...
159.0 [0..2] [284..217]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLLLALLPA LFWGSIVLFN VKLGGGPYSQ TLGTTIGALI VSIVIYFFVQ PVLSLRIFIV  60
   61 GIVSGLFWSL GQANQLKSIQ LMGVSKTMPI STGMQLVSTS LFGVIVFREW STPIAITLGV 120
  121 LALIFIIVGI ILTSLED

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.04
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #2
Region A:
Residues: [138-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNDKKEGEPS NLKKGILILL VSTLGYLVYV VVARLFNVSG WSALLPQAIG MVVGGLVLTY  60
   61 RHKPFNKYAI RNILPGLIWA GGNMFLFISQ PRVGVATSFS LSQMGIVIST LGGIFILREK 120
  121 KTKRQLIAIA IGIILIIAAA VFLGIAKTNS 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 27.958607
Match: PF06800.3
Description: No description for PF06800.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle