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View Structure Prediction Details

Protein: gi|221313752
Organism: Bacillus subtilis subsp. subtilis str. NCIB 3610
Length: 256 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221313752.

Description E-value Query
Range
Subject
Range
PYRK_GEOKA - Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit OS=Geobacillus kaustophilus (stra...
PYRK_GEOKA - Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit OS=Geobacillus kaustophilus GN=py...
224.0 [0..3] [256..4]

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Predicted Domain #1
Region A:
Residues: [1-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKAYLTVCS NQQIADRVFQ MVLKGELVQG FTTPGQFLHL KVSEAVTPLL RRPISIADVN  60
   61 FEKNEVTIIY RVDGEGTRLL SLKQQGELVD VLGPLGNGFP VNEVQPGKTA LLVGGGVGVP 120
  121 PLQELSKRLI EKGVNVIHVL GFQSAKDVFY EEECRQYGDT YVATADGSYG ETGFVTDVIK 180
  181 RKKLEFDILL SCGPTPMLKA LKQEYAHKEV YLSMEERMGC GIGACFACVC HTNESETSYV 240
  241 KVCLDGPVFK AQEVAL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.39794
Match: 1ep3B
Description: Dihydroorotate dehydrogenase B, PyrK subunit
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle