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View Structure Prediction Details

Protein: gi|220959076
Organism: synthetic construct
Length: 301 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220959076.

Description E-value Query
Range
Subject
Range
gi|21483356 - gi|21483356|gb|AAM52653.1| GM25741p [Drosophila melanogaster]
299.0 [0..1] [301..9]

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Predicted Domain #1
Region A:
Residues: [1-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTTRSTRLL SLARRFVHTR TASQSAQNSK GMASGAESIS GKEKTTHFGF QTVRESEKEQ  60
   61 KVHEVFEQVA NSYDVMNDAM SLGIHRVWKD VFVERLGPTH GMRLLDMAGG TGDITFRYLR 120
  121 YLNNQPNPQQ RPSHVTVSDI NQHMLNVGEE RAKRLGLTTD QLSNCTVAWQ CADAEKLPFP 180
  181 DASFTAYTIA FGIRNCTHVD KVLSEAYRVL QPGGRFMCLE FSHLTNETMQ WLYDQYSFQV 240
  241 IPPMGQLLAG QWQAYQYLVE SIRRFPKQEQ FKQMIEQAGF DQVSYENLTF GVVSIHSGFK 300
  301 L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.154902
Match: 1ve3A
Description: Crystal structure of PH0226 protein from Pyrococcus horikoshii OT3
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.25333584501255 bayes_pls_golite062009
transferase activity 1.07321114919891 bayes_pls_golite062009
oxidoreductase activity 0.964067575431689 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.612108481676679 bayes_pls_golite062009
methyltransferase activity 0.606225212585352 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 0.14147363365106 bayes_pls_golite062009
binding 0.109975487409217 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle