YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|221319924
Organism:	Bacillus subtilis subsp. subtilis str. JH642
Length:	273 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221319924.

Description	E-value	Query Range	Subject Range
gi\|229499644, gi... - gi\|229499644\|ref\|ZP_04393326.1\| extracellular solute-binding protein family 3 [Geobacillus sp. Y412M... gi\|221089580, gi... - gi\|221089580\|ref\|ZP_03559095.1\| extracellular solute-binding protein family 3 [Geobacillus sp. Y412M... gi\|56420512, gi\|... - gi\|56420512\|ref\|YP_147830.1\| glutamine ABC transporter (glutamine-binding protein) [Geobacillus kaus...	251.0	[0..2]	[273..7]

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Predicted Domain #1

Region A:
Residues: [1-273]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIFSLALI SLFAVILLAA CGSKGSNGEA SKESKKDTLA AIKDNDKIVF GVKTDTRLFG  60
   61 LKNPSSGEIE GFDIDIAKQI AKDILGDEKK AQFKEVTSKT RIPMLQNGDI DAIVATMTIT 120
  121 EERKKEVDFS DVYFEAGQSL LVKKGSKIKS VENLGKGSKV LAVKGSTSSQ NIREKAPEAS 180
  181 VLEFENYAEA FTALKSGQGD ALTTDNAILY GMADENKNYQ LTGKPFTDEP YGIAVKKGQS 240
  241 ALAKEINASL KKMKSDGRYD EIYKKWIKED PAE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	40.221849
Match:	2v25A
Description:	No description for 2v25A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits