| Protein: | gi|221315390 |
| Organism: | Bacillus subtilis subsp. subtilis str. NCIB 3610 |
| Length: | 662 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221315390.
| Description | E-value | Query Range |
Subject Range |
|
|
358.0 | [0..1] | [661..1] |
|
Region A: Residues: [1-259] |
1 11 21 31 41 51
| | | | | |
1 MGKFIQWIKQ PSISKPLIAA FLAVLILPVG VLAYFSYQSA WNALDRELIS SAKGNVEELN 60
61 STLQNKLEDK VKAIDYYSET VDKDILLGKN KTLLKEKFKQ YTTLNDDVGA IYAASEDKKL 120
121 YKYPDSGVPK GFDPTGRDWY KQAVAEKGQA VFSEPYTDEA TGDIVVTISK QLKDGSGVIA 180
181 LDLNLDEVLT ASKRIKIGKE GFAFITTGNK KYIAHPTIKP GTTGSGDWTN QVYSKKEGSF 240
241 EYTFEGKEKK MAFTTNKLT
|
| Detection Method: |  |
| Confidence: | 4.02 |
| Match: | 2p7jA |
| Description: | No description for 2p7jA was found. |
| Term | Confidence | Notes |
| binding | 0.150351422026587 | bayes_pls_golite062009 |
|
Region A: Residues: [260-359] |
1 11 21 31 41 51
| | | | | |
1 GWKIAGTYFV SELQDASSPV LNTAVIILCV SIVIGGILIL YIIRAITKPL RKLVSTSAKI 60
61 SSGDLTEVID IHSKNEFGQL GESFNEMSAS LRSVIGVIQT
|
| Detection Method: | |
| Confidence: | 3.16 |
| Match: | 2f95B |
| Description: | M intermediate structure of sensory rhodopsin II/transducer complex in combination with the ground state structure |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [360-662] |
1 11 21 31 41 51
| | | | | |
1 SVENVASSSE ELTASAAQTS KATEHITLAI EQFSDGNEAQ SEKLETSSNH LSQMNEGISK 60
61 VAQASSTITK SSIQSSEAAG SGEKLVEHTV GQMKTIDQSV QKAEAVVKGL ETKSQDITSI 120
121 LNVINGIADQ TNLLALNAAI EAARAGEYGR GFSVVAEEVR KLAVQSADSA KEIEGLIQEI 180
181 VREISTSLSM FQSVNHEVKE GLQITDQTAE SFKQIYEMTT QISGELQNLN ATVEQLSAGS 240
241 QEVSSAVEDI SAVAKESSAG IQDIAASAEE QLASMEEISS SAETLANMAE ELQDITKKFK 300
301 IES
|
| Detection Method: | |
| Confidence: | 24.221849 |
| Match: | 2ch7A |
| Description: | No description for 2ch7A was found. |
