| Protein: | PKL_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1384 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for PKL_ARATH.
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 MSSLVERLRI RSDRKPVYNL DDSDDDDFVP KKDRTFEQVE AIVRTDAKEN ACQACGESTN 60
61 LVSCNTCTYA FHAKCLVPPL KDASVENWRC PECV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [95-242] |
1 11 21 31 41 51
| | | | | |
1 SPLNEIDKIL DCEMRPTKSS EQGSSDAEPK PIFVKQYLVK WKGLSYLHCS WVPEKEFQKA 60
61 YKSNHRLKTR VNNFHRQMES FNNSEDDFVA IRPEWTTVDR ILACREEDGE LEYLVKYKEL 120
121 SYDECYWESE SDISTFQNEI QRFKDVNS
|
| Detection Method: | |
| Confidence: | 8.0 |
| Match: | 2b2uA |
| Description: | Tandem chromodomains of human CHD1 complexed with Histone H3 Tail containing trimethyllysine 4 and dimethylarginine 2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [243-827] |
1 11 21 31 41 51
| | | | | |
1 RTRRSKDVDH KRNPRDFQQF DHTPEFLKGL LHPYQLEGLN FLRFSWSKQT HVILADEMGL 60
61 GKTIQSIALL ASLFEENLIP HLVIAPLSTL RNWEREFATW APQMNVVMYF GTAQARAVIR 120
121 EHEFYLSKDQ KKIKKKKSGQ ISSESKQKRI KFDVLLTSYE MINLDSAVLK PIKWECMIVD 180
181 EGHRLKNKDS KLFSSLTQYS SNHRILLTGT PLQNNLDELF MLMHFLDAGK FGSLEEFQEE 240
241 FKDINQEEQI SRLHKMLAPH LLRRVKKDVM KDMPPKKELI LRVDLSSLQK EYYKAIFTRN 300
301 YQVLTKKGGA QISLNNIMME LRKVCCHPYM LEGVEPVIHD ANEAFKQLLE SCGKLQLLDK 360
361 MMVKLKEQGH RVLIYTQFQH MLDLLEDYCT HKKWQYERID GKVGGAERQI RIDRFNAKNS 420
421 NKFCFLLSTR AGGLGINLAT ADTVIIYDSD WNPHADLQAM ARAHRLGQTN KVMIYRLINR 480
481 GTIEERMMQL TKKKMVLEHL VVGKLKTQNI NQEELDDIIR YGSKELFASE DDEAGKSGKI 540
541 HYDDAAIDKL LDRDLVEAEE VSVDDEEENG FLKAFKVANF EYIDE
|
| Detection Method: | |
| Confidence: | 83.69897 |
| Match: | 1z3iX |
| Description: | Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [828-909] |
1 11 21 31 41 51
| | | | | |
1 NEAAALEAQR VAAESKSSAG NSDRASYWEE LLKDKFELHQ AEELNALGKR KRSRKQLVSI 60
61 EEDDLAGLED VSSDGDESYE AE
|
| Detection Method: | |
| Confidence: | 25.657577 |
| Match: | PF06465.5 |
| Description: | No description for PF06465.5 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [910-1065] |
1 11 21 31 41 51
| | | | | |
1 STDGEAAGQG VQTGRRPYRR KGRDNLEPTP LMEGEGRSFR VLGFNQSQRA IFVQTLMRYG 60
61 AGNFDWKEFV PRLKQKTFEE INEYGILFLK HIAEEIDENS PTFSDGVPKE GLRIEDVLVR 120
121 IALLILVQEK VKFVEDHPGK PVFPSRILER FPGLRS
|
| Detection Method: | |
| Confidence: | 98.337242 |
| Match: | PF06461.3 |
| Description: | No description for PF06461.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1066-1131] |
1 11 21 31 41 51
| | | | | |
1 GKIWKEEHDK IMIRAVLKHG YGRWQAIVDD KELGIQELIC KELNFPHISL SAAEQAGLQG 60
61 QNGSGG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1132-1384] |
1 11 21 31 41 51
| | | | | |
1 SNPGAQTNQN PGSVITGNNN ASADGAQVNS MFYYRDMQRR LVEFVKKRVL LLEKAMNYEY 60
61 AEEYYGLGGS SSIPTEEPEA EPKIADTVGV SFIEVDDEML DGLPKTDPIT SEEIMGAAVD 120
121 NNQARVEIAQ HYNQMCKLLD ENARESVQAY VNNQPPSTKV NESFRALKSI NGNINTILSI 180
181 TSDQSKSHED DTKPDLNNVE MKDTAEETKP LRGGVVDLNV VEGEENIAEA SGSVDVKMEE 240
241 AKEEEKPKNM VVD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
