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View Structure Prediction Details

Protein: gi|218202459
Organism: Oryza sativa Indica Group
Length: 336 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218202459.

Description E-value Query
Range
Subject
Range
gi|21070362 - gi|21070362|gb|AAM34273.1|AF508863_1 glyoxalase II [Pennisetum glaucum]
358.0 [0..1] [336..1]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMLSKACSL VASSLPRCSS SAAPTIRGQP SLLPSVRKEW LGKPLLYGIG TLLVMPLRTL  60
   61 HGVGRMFGAG RFLCNMTSVS 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [81-336]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSLQIELVPC LQDNYAYILH DVDTGTVGVV DPSEATPIIN ALEKRNQNLT YILNTHHHYD  60
   61 HTGGNLELKA KYGAKVIGSA KDRDRIPGID ITLSEGDTWM FAGHQVLVME TPGHTSGHVC 120
  121 YHFPGSGAIF TGDTLFSLSC GKLFEGTPQQ MYSSLQKIIA LPDETRVYCG HEYTLSNSKF 180
  181 ALSIEPGNKD LQEYAANAAD LRKRNTPTVP TTIGREKQCN PFLRTSSPEI KNTLSIPDHF 240
  241 DDARVLEVVR RAKDNF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.69897
Match: 1xm8A
Description: X-RAY STRUCTURE OF GLYOXALASE II FROM ARABIDOPSIS THALIANA GENE AT2G31350
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydroxyacylglutathione hydrolase activity 3.53012507604564 bayes_pls_golite062009
catalytic activity 0.941400907161877 bayes_pls_golite062009
binding 0.900972948435178 bayes_pls_golite062009
thiolester hydrolase activity 0.802604883362264 bayes_pls_golite062009
hydrolase activity 0.021392930321391 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle