| Protein: | gi|221318736 |
| Organism: | Bacillus subtilis subsp. subtilis str. JH642 |
| Length: | 691 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221318736.
| Description | E-value | Query Range |
Subject Range |
|
|
812.0 | [0..1] | [688..1] |
|
Region A: Residues: [1-575] |
1 11 21 31 41 51
| | | | | |
1 MSDYLVIVES PAKAKTIERY LGKKYKVKAS MGHVRDLPKS QMGVDIEQNF EPKYITIRGK 60
61 GPVLKELKTA AKKAKKVYLA ADPDREGEAI AWHLAHSLDL DLNSDCRVVF NEITKDAIKE 120
121 SFKHPRMINM DLVDAQQARR ILDRLVGYKI SPILWKKVKK GLSAGRVQSV ALRLIIDREK 180
181 EINDFKPEEY WTIDGTFLKG QETFEASFFG KNGKKLPLNS EADVKEILSQ LKGNQYTVEK 240
241 VTKKERKRNP ALPFTTSTLQ QEAARKLNFR AKKTMMIAQQ LYEGIDLGRE GTVGLITYMR 300
301 TDSTRISNTA VDEAAAFIDQ TYGKEFLGGK RKPAKKNENA QDAHEAIRPT SVLRKPSELK 360
361 AVLGRDQMRL YKLIWERFVA SQMAPAVLDT MSVDLTNNGL TFRANGSKVK FSGFMKVYVE 420
421 GKDDQMEEKD RMLPDLQEGD TVLSKDIEPE QHFTQPPPRY TEARLVKTLE ERGIGRPSTY 480
481 APTLDTIQRR GYVALDNKRF VPTELGQIVL DLIMEFFPEI INVEFTAKME RDLDHVEEGN 540
541 TEWVKIIDNF YTDFEKRVKK AESEMKEVEI EPEYA
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1cy0A |
| Description: | DNA topoisomerase I, 67K N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA topoisomerase activity | 9.28485802237784 | bayes_pls_golite062009 |
| DNA topoisomerase type I activity | 6.20416707013367 | bayes_pls_golite062009 |
| isomerase activity | 5.61256457337998 | bayes_pls_golite062009 |
| nucleic acid binding | 3.37048693883188 | bayes_pls_golite062009 |
| DNA binding | 3.2732257752308 | bayes_pls_golite062009 |
| binding | 3.07618319631815 | bayes_pls_golite062009 |
| catalytic activity | 1.50449367975676 | bayes_pls_golite062009 |
|
Region A: Residues: [576-691] |
1 11 21 31 41 51
| | | | | |
1 GEDCELCSSP MVYKMGRYGK FLACSNFPDC RNTKPIVKQI GVKCPSCGEG NIVERKSKKK 60
61 RVFYGCDRYP DCEFVSWDKP IERKCPKCGK MLVEKKLKKG IQVQCVECDY KEEPQK
|
| Detection Method: | |
| Confidence: | 1.02 |
| Match: | 1i3qI |
| Description: | RBP9 subunit of RNA polymerase II |
Matching Structure (courtesy of the PDB): |
|
