| Protein: | gi|190408507 |
| Organism: | Saccharomyces cerevisiae RM11-1a |
| Length: | 304 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190408507.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-86 | [1..304] | [1..304] |
|
|
6.0E-56 | [23..299] | [2..244] |
|
|
1.0E-53 | [21..301] | [11..251] |
|
|
2.0E-49 | [52..287] | [1..261] |
|
|
2.0E-49 | [21..299] | [11..249] |
|
|
6.0E-48 | [56..281] | [6..253] |
|
|
9.0E-43 | [3..301] | [7..244] |
|
|
8.0E-40 | [32..248] | [12..230] |
|
|
3.0E-39 | [32..248] | [16..235] |
|
Region A: Residues: [1-250] |
1 11 21 31 41 51
| | | | | |
1 MKMLRRTKVN FSKLLYKITK LAIVLTILYI YFTPKIVSRN NASLQHIFPH KYGDYEINLV 60
61 IAHPDDEVMF FSPIISQLNS YFPRTVPFNI ICLSKGNAEG LGETRVRELN ESAALLLHNE 120
121 RAVSVQVMDF QDGMDEIWDI DSITSSLSQK IDIKNHNLNQ IIVTFDSYGV SNHINHKSCY 180
181 AAVKKLVDDY AQPKTKRNEQ PPHVTALYLR SYKNNIVLKY NSFIWEILKI LYDLISPFRR 240
241 IIQALPPNTA
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [251-304] |
1 11 21 31 41 51
| | | | | |
1 AEKDKLSLMN THAQYVLAFA TMLNAHESQV VWFRYGWWIF SRFVFVNEFD VYTY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.572 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.517 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.534 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.481 | d.58.36 | Sulfite reductase, domains 1 and 3 |
| View | Download | 0.545 | d.58.35 | Pseudouridine synthase |
| View | Download | 0.438 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| View | Download | 0.373 | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.367 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.361 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.360 | g.3.7 | Scorpion toxin-like |
| View | Download | 0.356 | d.37.1 | CBS-domain |
| View | Download | 0.339 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.325 | c.47.1 | Thioredoxin-like |
| View | Download | 0.308 | d.68.7 | R3H domain |
| View | Download | 0.290 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.285 | d.230.3 | Amyloid beta a4 protein copper binding domain (domain 2) |
| View | Download | 0.271 | d.95.2 | Homing endonucleases |
| View | Download | 0.262 | d.58.17 | Metal-binding domain |
| View | Download | 0.261 | d.58.10 | Acylphosphatase-like |
| View | Download | 0.255 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.252 | d.80.1 | Tautomerase/MIF |
| View | Download | 0.249 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.246 | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.240 | d.95.2 | Homing endonucleases |
| View | Download | 0.233 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.228 | d.40.1 | CI-2 family of serine protease inhibitors |
| View | Download | 0.225 | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.222 | b.122.1 | PUA domain-like |
| View | Download | 0.219 | d.40.1 | CI-2 family of serine protease inhibitors |
| View | Download | 0.219 | d.230.2 | Flavin-binding protein dodecin |
| View | Download | 0.213 | a.4.1 | Homeodomain-like |
| View | Download | 0.207 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.206 | g.3.7 | Scorpion toxin-like |
| View | Download | 0.203 | d.88.1 | SRF-like |
