YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|221315240
Organism:	Bacillus subtilis subsp. subtilis str. NCIB 3610
Length:	210 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221315240.

Description	E-value	Query Range	Subject Range
gi\|221088206, gi... - gi\|221088206\|ref\|ZP_03557739.1\| acetoin utilization protein [Geobacillus sp. Y412MC61], gi\|220707968... gi\|229497155, gi... - gi\|229497155\|ref\|ZP_04390856.1\| acetoin utilization protein [Geobacillus sp. Y412MC52], gi\|229331633... gi\|56421342, gi\|... - gi\|56421342\|ref\|YP_148660.1\| acetoin utilization protein [Geobacillus kaustophilus HTA426], gi\|56381...	404.0	[0..1]	[210..1]

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Predicted Domain #1

Region A:
Residues: [1-210]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHHKTYHSA NIKTATGSLL IEGPVSPEDL AGYEFHKDLT AFRPPREQHE ALVDIAGLPE  60
   61 GRIIIARDGR TIVGYVTYLY PDPLERWSEG NMEDLIELGA IEVAPDYRGC AVGKTLLTVS 120
  121 MMDEQMENYI VMTTEYYWHW DLKGMKKDVW EYRKIMEKMM NAGGLVWFAT DEPEISSHPA 180
  181 NCLMARIGKN VSQESIEQFD RLRFYHRYMY

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Detection Method:	PSI-BLAST
Confidence:	100.0
Match:	2q04A
Description:	No description for 2q04A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits