YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|221318179
Organism:	Bacillus subtilis subsp. subtilis str. JH642
Length:	236 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221318179.

Description	E-value	Query Range	Subject Range
gi\|86556476, gi\|... - gi\|86607934\|ref\|YP_476696.1\| phosophoadenylyl-sulfate reductase [Synechococcus sp. JA-2-3B'a(2-13)],... gi\|86607934 - gi\|86607934\|ref\|YP_476696.1\| phosophoadenylyl-sulfate reductase [Cyanobacteria bacterium Yellowstone...	231.0	[0..1]	[235..1]

Back

Predicted Domain #1

Region A:
Residues: [1-236]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNETITYDTW NDMLSKQITD QLIDELDVLK WAYRTYGEKI VYACSFGAEG MVLLDLISKI  60
   61 NKNAHIIFLD TGLHFQETYE LIETVKERYP GFAIQMLEPE LSLTEQGTKY GGELWKHNPN 120
  121 LCCQLRKIEP LKKHLSGMTA WISGLRRDQS PTRKHIQYVN LDQKFELIKI CPLIHWTWDD 180
  181 VWTYIRLHNL PYNKLHDQHY PSIGCEMCTL PSPDPNDERA GRWAGREKTE CGLHQE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	49.221849
Match:	2goyA
Description:	No description for 2goyA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits