| Protein: | gi|190405699 |
| Organism: | Saccharomyces cerevisiae RM11-1a |
| Length: | 556 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190405699.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [1..556] | [1..556] |
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0.0 | [28..460] | [190..614] |
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0.0 | [37..461] | [144..530] |
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0.0 | [7..410] | [63..496] |
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2.0E-74 | [193..449] | [257..494] |
|
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1.0E-41 | [227..378] | [1038..1184] |
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2.0E-15 | [140..193] | [65..118] |
|
Region A: Residues: [1-139] |
1 11 21 31 41 51
| | | | | |
1 MQHKDTAVAK DTAKKRLLRR NSAPSAIHII SRLDKKWSFL WNTIDRHNIV EEQDESSAAK 60
61 SEEEHEDDYE LEQLLNMIRI PMFLEKFMLF ALLTSLDCFL YYFTVLPIRL IKGYVKQFKS 120
121 YRQHYRLQQR SGHKNKIPF
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.224 | 0.839 | mitochondrion | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.202 | 0.839 | mitochondrion | a.1.1 | Globin-like |
| View | Download | 0.237 | 0.839 | mitochondrion | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.202 | 0.839 | mitochondrion | b.34.8 | Fumarylacetoacetate hydrolase, FAH, N-terminal domain |
| View | Download | 0.385 | 0.839 | mitochondrion | c.20.1 | Initiation factor IF2/eIF5b, domain 3 |
| View | Download | 0.385 | 0.839 | mitochondrion | c.20.1 | Initiation factor IF2/eIF5b, domain 3 |
| View | Download | 0.237 | 0.839 | mitochondrion | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.224 | 0.839 | mitochondrion | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.202 | 0.839 | mitochondrion | a.1.1 | Globin-like |
| View | Download | 0.202 | 0.839 | mitochondrion | b.34.8 | Fumarylacetoacetate hydrolase, FAH, N-terminal domain |
|
Region A: Residues: [140-213] |
1 11 21 31 41 51
| | | | | |
1 RYRITSREYK ERCMIFIIVI SSILLSKLDT SKLYHRIKRQ STMKLYMLFS VLEMADKMLA 60
61 SLGQSLLTVM LSRK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.811 | 0.003 | mitochondrion | a.2.3 | Chaperone J-domain |
| View | Download | 0.627 | 0.002 | mitochondrion | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.616 | 0.001 | mitochondrion | a.2.7 | tRNA-binding arm |
| View | Download | 0.816 | 0.000 | mitochondrion | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.743 | 0.000 | mitochondrion | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.816 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.811 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.743 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.719 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.710 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.612 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.559 | N/A | N/A | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.490 | N/A | N/A | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.486 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.468 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.435 | N/A | N/A | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.425 | N/A | N/A | a.30.1 | ROP protein |
| View | Download | 0.417 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.402 | N/A | N/A | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.396 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.387 | N/A | N/A | d.216.1 | Rotavirus NSP2 fragment, N-terminal domain |
| View | Download | 0.385 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.373 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.371 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.364 | N/A | N/A | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.354 | N/A | N/A | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.352 | N/A | N/A | f.28.1 | Nonheme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.351 | N/A | N/A | a.59.1 | PAH2 domain |
| View | Download | 0.338 | N/A | N/A | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.336 | N/A | N/A | a.138.1 | Multiheme cytochromes |
| View | Download | 0.329 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.326 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.324 | N/A | N/A | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.319 | N/A | N/A | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.318 | N/A | N/A | d.57.1 | DNA damage-inducible protein DinI |
| View | Download | 0.316 | N/A | N/A | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.316 | N/A | N/A | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.311 | N/A | N/A | d.58.13 | Anticodon-binding domain of PheRS |
| View | Download | 0.306 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.304 | N/A | N/A | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.299 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.294 | N/A | N/A | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.291 | N/A | N/A | a.54.1 | Domain of early E2A DNA-binding protein, ADDBP |
| View | Download | 0.290 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.290 | N/A | N/A | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.285 | N/A | N/A | a.4.12 | TrpR-like |
| View | Download | 0.285 | N/A | N/A | a.2.9 | C-terminal UvrC-binding domain of UvrB |
| View | Download | 0.284 | N/A | N/A | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.281 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.280 | N/A | N/A | a.144.1 | PABC (PABP) domain |
| View | Download | 0.274 | N/A | N/A | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.271 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.271 | N/A | N/A | a.156.1 | S13-like H2TH domain |
| View | Download | 0.270 | N/A | N/A | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.269 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.264 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.259 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.254 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.253 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.252 | N/A | N/A | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.250 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.247 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.247 | N/A | N/A | a.144.1 | PABC (PABP) domain |
| View | Download | 0.240 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.236 | N/A | N/A | f.17.2 | Cytochrome c oxidase subunit II-like, transmembrane region |
| View | Download | 0.232 | N/A | N/A | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.231 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.221 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.221 | N/A | N/A | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.220 | N/A | N/A | d.78.1 | RPB5-like RNA polymerase subunit |
| View | Download | 0.220 | N/A | N/A | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.219 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.215 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.215 | N/A | N/A | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.214 | N/A | N/A | d.58.43 | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
| View | Download | 0.212 | N/A | N/A | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.205 | N/A | N/A | d.95.2 | Homing endonucleases |
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Region A: Residues: [214-415] |
1 11 21 31 41 51
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1 NSERILLHKC LLVSMSLTYV TIHGYVLVYQ AISLNIAVNS YSNALLTLLL SMQFAEIKSS 60
61 VLKKFDKEGF FQITIADVVE RFKLTLLLSI TGLRNLQSWS SSLSNTSINF WSPRSTLSIV 120
121 INILCGPMVS VVGSEVLVDW AKHAYITKFN RIRPQIYDKF YYIIYKDYST RTHKLEDRLG 180
181 LPLPAFVVLF IVMVRPTLFK SS
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [416-556] |
1 11 21 31 41 51
| | | | | |
1 EPSYLPSLFR ILFMGASVFL LALLAKFTLD LILIKWSKRI EQRFRDQAFN TVVTEEEYVP 60
61 GLLSGGMGKV DVSTRIALHS DYNKENRIET ESVSPMRKRK TTLTAECTPP SLNDIRRQKD 120
121 SKNPRSLENV ARYKMVSKRI W
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.231 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.279 | a.47.2 | t-snare proteins |
| View | Download | 0.314 | a.24.2 | Aspartate receptor, ligand-binding domain |
| View | Download | 0.314 | a.24.2 | Aspartate receptor, ligand-binding domain |
| View | Download | 0.279 | a.47.2 | t-snare proteins |
| View | Download | 0.231 | d.19.1 | MHC antigen-recognition domain |
