| Protein: | gi|190406284 |
| Organism: | Saccharomyces cerevisiae RM11-1a |
| Length: | 678 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190406284.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..678] | [1..678] |
|
Region A: Residues: [1-173] |
1 11 21 31 41 51
| | | | | |
1 MGVHFDDNAN TTWEATDPGV SSDCDGQHRV TESIQLQNFS NTDMESMLDE EGRENSKSKW 60
61 LLLKRKHPIQ KFIERVWNGP VEPSDEPPSF PKRWGWLKKI DDFPQTTFKT KIPSKLIRLL 120
121 LLIVYCCFWM RIFYSLIYPY LIKPPYFHPN DGSEKIPILS LSCNSYLNWE GTN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [174-304] |
1 11 21 31 41 51
| | | | | |
1 NECGLNAKNC GPLDNKEYMI RCPALCDRGG WTYSAIAVGN RRVKYTGYEI GGGALFSEED 60
61 PMVVSYPYRS DSFPCASAVH AGVISPFYGG CTKVSMQGAQ NSFPSKKGMY NTGFSVAFNS 120
121 FFPGSYSFRD I
|
| Detection Method: | |
| Confidence: | 7.42 |
| Match: | 1jbiA |
| Description: | Cochlin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [305-678] |
1 11 21 31 41 51
| | | | | |
1 QGGILSGCYD PRAAVVALNM LFGLPIFYLY DSIYGYWINT IVGYWTLVLS LDPPLLTDAH 60
61 DPASVYELFS VGFQRLLPLC FVLYVVWKSA VKRTLENGSP IAKVILWYPT FWLGISNNVT 120
121 FDRLPVDRLT TTDLKEQAGA LTAVGSIAAT ILTCAVIQAY SLWKSGRFKK YFKIYICFIG 180
181 GLIALGSLPG LNLRIHHYIL GSILVPGCAT RGSSAYLFQG ILVGLILSGV ARWDFASIVE 240
241 TDTALLRGEA GASLKPPILD FNDDQNHSLS WHLNATDPVI DQIGNIDGFS LLLNDVEVYV 300
301 GKNETVSIDV LRMENPALAQ MMDDALDASN GTIDLYLRVA RASVRSPTNR GDYTNAGVLQ 360
361 WPNGMWQKPE PGVS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [553-678] |
1 11 21 31 41 51
| | | | | |
1 EAGASLKPPI LDFNDDQNHS LSWHLNATDP VIDQIGNIDG FSLLLNDVEV YVGKNETVSI 60
61 DVLRMENPAL AQMMDDALDA SNGTIDLYLR VARASVRSPT NRGDYTNAGV LQWPNGMWQK 120
121 PEPGVS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.570 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.379 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.366 | d.203.1 | DsrC, the gamma subunit of dissimilatory sulfite reductase |
| View | Download | 0.353 | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.313 | d.95.2 | Homing endonucleases |
