YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|208740594, gi...
Organism:	Escherichia coli O157:H7 str. EC4042
Length:	216 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|208740594, gi....

Description	E-value	Query Range	Subject Range
gi\|229811380, gi... - gi\|229845694\|ref\|ZP_04465817.1\| phosphoglycolate phosphatase [Haemophilus influenzae 6P18H1], gi\|229... gi\|144985848, gi... - gi\|145633479\|ref\|ZP_01789208.1\| phosphoglycolate phosphatase [Haemophilus influenzae 3655], gi\|14498... GPH_HAEI8 - Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain 86-028NP) GN=NTHI0697 PE=3 SV=1	167.0	[0..2]	[207..4]
gi\|145272121, gi... - gi\|145638526\|ref\|ZP_01794135.1\| phosphoglycolate phosphatase [Haemophilus influenzae PittII], gi\|145... gi\|53733330 - gi\|53733330\|ref\|ZP_00156383.2\| COG0546: Predicted phosphatases [Haemophilus influenzae R2866]	165.0	[0..2]	[207..4]
GPH_HAEIN - Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) G... GPH_HAEIN - Phosphoglycolate phosphatase OS=Haemophilus influenzae GN=gph PE=3 SV=1	165.0	[0..2]	[207..4]
GPH_PASMU - Phosphoglycolate phosphatase OS=Pasteurella multocida (strain Pm70) GN=gph PE=3 SV=1 GPH_PASMU - Phosphoglycolate phosphatase OS=Pasteurella multocida GN=gph PE=3 SV=1	161.0	[0..2]	[208..3]
gi\|88790279, gi\|... - gi\|88812493\|ref\|ZP_01127742.1\| 2-phosphoglycolate phosphatase [Nitrococcus mobilis Nb-231], gi\|88790...	160.0	[0..3]	[211..5]
gi\|42630012 - gi\|42630012\|ref\|ZP_00155557.1\| COG0546: Predicted phosphatases [Haemophilus influenzae R2846]	159.0	[0..2]	[207..4]
gi\|112822365, gi... - gi\|113460322\|ref\|YP_718383.1\| phosphoglycolate phosphatase [Haemophilus somnus 129PT], gi\|112822365\|...	158.0	[0..2]	[206..3]
gi\|170718574, gi... - gi\|53728307\|ref\|ZP_00348122.1\| COG0546: Predicted phosphatases [Haemophilus somnus 2336], gi\|1707185...	158.0	[0..2]	[206..3]
GPH_MANSM - Phosphoglycolate phosphatase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=MS2331 PE=3 SV=1	157.0	[0..2]	[207..4]

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Predicted Domain #1

Region A:
Residues: [1-216]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCKGFLFDL DGTLVDSLPA VERAWSNWAR RHGLAPEEVL AFIHGKQAIT SLRHFMAGKS  60
   61 EADIAAEFTR LEQIEATETE GITALPGAIA LLNHLNKAGI PWAIVTSGSM PVARARHKIA 120
  121 GLPAPEVFVT AERVKRGKPE PDAYLLGAQL LGLAPQECVV VEDAPAGVLS GLAAGCHVIA 180
  181 VNAPADTPRL NEVDLVLHSL EQITVTKQPN GDVIIQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	39.154902
Match:	2hszA
Description:	No description for 2hszA was found.

Predicted functions:

Term	Confidence	Notes
hydrolase activity	2.8454129466116	bayes_pls_golite062009
nucleic acid binding	1.64783368699113	bayes_pls_golite062009
catalytic activity	1.55296860681783	bayes_pls_golite062009
DNA binding	1.54082169986159	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	1.35602953485803	bayes_pls_golite062009
binding	1.09759217679659	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	0.935808143963595	bayes_pls_golite062009
ion transmembrane transporter activity	0.889937515134655	bayes_pls_golite062009
cation transmembrane transporter activity	0.831747362121661	bayes_pls_golite062009
phosphatase activity	0.492682050529181	bayes_pls_golite062009
phosphoric ester hydrolase activity	0.290586637688845	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: