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View Structure Prediction Details

Protein: gi|15451579
Organism: Oryza sativa Japonica Group
Length: 463 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15451579.

Description E-value Query
Range
Subject
Range
gi|113537972, gi... - gi|115449335|ref|NP_001048441.1| Os02g0805500 [Oryza sativa (japonica cultivar-group)], gi|113537972...
287.0 [0..61] [463..75]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCSGLRLPT WAAAAPPSPS DWDGRRPRRG APVVRRRCSA PSSTPAPSAA AAPSHLAAGG  60
   61 SPRVGTAEHD WLWDCRGIGG GGR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [84-463]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DYAREMEVAV RVVQAACTLC QRVQSSLLLP ASASASGSVH SKIDRSPVTV ADWGVQAIVS  60
   61 WLLSDCFQDE NISIVAEEDD ETLSSSDGAA LLESVVAAVN GCLIEAPKYG LRSPEKELKA 120
  121 HDILQAIRRC SSIGGPKGRF WVLDPVDGTL GFVRGDQYAV ALALIEDGEV VLGVLGCPNY 180
  181 PMKKEWLNYH QRYYRLMSKV SPPTSGSWHK GCVMYAHRGC GQAWMQPLVH DFGKLDWRNS 240
  241 REVRVSTVSD PISATFCEPV EKANTSHSFT AGLAHSVGLR KQPLRVYSMV KYAAIARGDV 300
  301 EIFMKFARAG YKEKIWDHAA GVVIIREAGG VITDAGGRPL DFSRGVFLEG LDRGIIACSG 360
  361 PLLHHRIVGA VDASWNSSTL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.69897
Match: 1k9yA
Description: 3';5'-adenosine bisphosphatase, PAP phosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 2.88760626317651 bayes_pls_golite062009
phosphatase activity 2.35747587631464 bayes_pls_golite062009
phosphoric ester hydrolase activity 2.15974571805101 bayes_pls_golite062009
catalytic activity 2.13229228332707 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.56919997723952 bayes_pls_golite062009
3'(2'),5'-bisphosphate nucleotidase activity 1.47057191917686 bayes_pls_golite062009
carbohydrate phosphatase activity 1.42298284519844 bayes_pls_golite062009
fructose 1,6-bisphosphate 1-phosphatase activity 1.27303304175364 bayes_pls_golite062009
binding 0.836667162379626 bayes_pls_golite062009
nucleotidase activity 0.335234714648046 bayes_pls_golite062009
protein binding 0.0338617836572318 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle