YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|221314817
Organism:	Bacillus subtilis subsp. subtilis str. NCIB 3610
Length:	172 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221314817.

Description	E-value	Query Range	Subject Range
gi\|25356478 - pir\|\|B83815 hypothetical protein BH1322 [imported] - Bacillus halodurans (strain C-125) gi\|10173938, gi\|... - gi\|15613885\|ref\|NP_242188.1\| hypothetical protein BH1322 [Bacillus halodurans C-125], gi\|10173938\|db...	156.0	[0..2]	[172..1]

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Predicted Domain #1

Region A:
Residues: [1-172]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKKFFLPDE FVKNIFHITP EKLKERNVKG IITDLDNTLV EWDRPNATPR LIEWFEEMKE  60
   61 HGIKVTIVSN NNERRVKLFS EPLGIPFIYK ARKPMGKAFN RAVRNMELKK EDCVVIGDQL 120
  121 LTDVLGGNRN GYHTILVVPV ASSDGFITRF NRQVERRILS ALKRKGHIQW EE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	25.522879
Match:	2hoqA
Description:	No description for 2hoqA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits