YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|221323763
Organism:	Bacillus subtilis subsp. subtilis str. SMY
Length:	124 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221323763.

Description	E-value	Query Range	Subject Range
gi\|4538520 - gi\|4538520\|emb\|CAB39370.1\| ribTD protein [Bacillus amyloliquefaciens]	192.0	[0..1]	[124..1]
gi\|28378544, gi\|... - gi\|28378544\|ref\|NP_785436.1\| hypothetical protein lp_1891 [Lactobacillus plantarum WCFS1], gi\|282713... gi\|254556758, gi... - gi\|254556758\|ref\|YP_003063175.1\| hypothetical protein JDM1_1591 [Lactobacillus plantarum JDM1], gi\|2...	189.0	[0..1]	[124..1]
gi\|56380670, gi\|... - gi\|56420828\|ref\|YP_148146.1\| hypothetical protein GK2293 [Geobacillus kaustophilus HTA426], gi\|56380...	187.0	[0..1]	[113..1]
gi\|52786210, gi\|... - gi\|52786210\|ref\|YP_092039.1\| RibT [Bacillus licheniformis ATCC 14580], gi\|52348712\|gb\|AAU41346.1\| Ri...	184.0	[0..1]	[123..1]
YLYA_BACMT - Uncharacterized N-acetyltransferase in lysA 3'region OS=Bacillus methanolicus PE=3 SV=1	177.0	[0..1]	[119..1]
gi\|78610280, gi\|... - gi\|81428638\|ref\|YP_395638.1\| hypothetical protein LSA1027 [Lactobacillus sakei subsp. sakei 23K], gi...	177.0	[0..1]	[120..1]
gi\|89149096, gi\|... - gi\|89202904\|ref\|ZP_01181609.1\| GCN5-related N-acetyltransferase [Bacillus cereus subsp. cytotoxis NV...	176.0	[0..1]	[121..1]
gi\|206971313, gi... - gi\|206971313\|ref\|ZP_03232264.1\| ribT protein [Bacillus cereus AH1134], gi\|206734085\|gb\|EDZ51256.1\| r... gi\|29897704, gi\|... - gi\|30022147\|ref\|NP_833778.1\| RibT protein [Bacillus cereus ATCC 14579], gi\|29897704\|gb\|AAP10979.1\| R... gi\|228967094, gi... - gi\|228967094\|ref\|ZP_04128130.1\| hypothetical protein bthur0004_38980 [Bacillus thuringiensis serovar... gi\|228960327, gi... - gi\|228960327\|ref\|ZP_04121980.1\| hypothetical protein bthur0005_37950 [Bacillus thuringiensis serovar... gi\|228805277, gi... - gi\|228954345\|ref\|ZP_04116371.1\| hypothetical protein bthur0006_37160 [Bacillus thuringiensis serovar... gi\|228857012, gi... - gi\|228902571\|ref\|ZP_04066722.1\| hypothetical protein bthur0014_37470 [Bacillus thuringiensis IBL 422... gi\|229111534, gi... - gi\|229111534\|ref\|ZP_04241085.1\| hypothetical protein bcere0018_37790 [Bacillus cereus Rock1-15], gi\|... gi\|229081318, gi... - gi\|229081318\|ref\|ZP_04213821.1\| hypothetical protein bcere0023_39520 [Bacillus cereus Rock4-2], gi\|2... gi\|229071565, gi... - gi\|229071565\|ref\|ZP_04204783.1\| hypothetical protein bcere0025_37340 [Bacillus cereus F65185], gi\|22... gi\|229047753, gi... - gi\|229047753\|ref\|ZP_04193333.1\| hypothetical protein bcere0027_37300 [Bacillus cereus AH676], gi\|228... gi\|228603087, gi... - gi\|229180340\|ref\|ZP_04307683.1\| hypothetical protein bcere0005_36850 [Bacillus cereus 172560W], gi\|2... gi\|229152263, gi... - gi\|229152263\|ref\|ZP_04280456.1\| hypothetical protein bcere0011_38020 [Bacillus cereus m1550], gi\|228... gi\|229146635, gi... - gi\|229146635\|ref\|ZP_04275002.1\| hypothetical protein bcere0012_37760 [Bacillus cereus BDRD-ST24], gi... gi\|228653946, gi... - gi\|229129341\|ref\|ZP_04258312.1\| hypothetical protein bcere0015_37840 [Bacillus cereus BDRD-Cer4], gi... gi\|218158846, gi... - gi\|218230889\|ref\|YP_002368864.1\| ribT protein [Bacillus cereus B4264], gi\|218158846\|gb\|ACK58838.1\| r... gi\|218899221, gi... - gi\|218899221\|ref\|YP_002447632.1\| ribT protein [Bacillus cereus G9842], gi\|218540630\|gb\|ACK93024.1\| r... gi\|229192273, gi... - gi\|229192273\|ref\|ZP_04319238.1\| hypothetical protein bcere0002_39260 [Bacillus cereus ATCC 10876], g...	175.0	[0..1]	[121..1]
gi\|229093118, gi... - gi\|229093118\|ref\|ZP_04224240.1\| hypothetical protein bcere0021_38560 [Bacillus cereus Rock3-42], gi\|... gi\|228729586, gi... - gi\|229031702\|ref\|ZP_04187695.1\| hypothetical protein bcere0028_37550 [Bacillus cereus AH1271], gi\|22... gi\|222097511, gi... - gi\|222097511\|ref\|YP_002531568.1\| RibT reductase protein (riboflavin biosynthesis) [Bacillus cereus Q... gi\|228585344, gi... - gi\|229198184\|ref\|ZP_04324893.1\| hypothetical protein bcere0001_37140 [Bacillus cereus m1293], gi\|228... gi\|229174735, gi... - gi\|229174735\|ref\|ZP_04302259.1\| hypothetical protein bcere0006_38220 [Bacillus cereus MM3], gi\|22860... gi\|206977431, gi... - gi\|206977431\|ref\|ZP_03238327.1\| ribT protein [Bacillus cereus H3081.97], gi\|206744422\|gb\|EDZ55833.1\|... gi\|217961552, gi... - gi\|217961552\|ref\|YP_002340122.1\| ribT protein [Bacillus cereus AH187], gi\|217067453\|gb\|ACJ81703.1\| r... gi\|51974900, gi\|... - gi\|52141431\|ref\|YP_085397.1\| RibT reductase protein (riboflavin biosynthesis) [Bacillus cereus E33L]... gi\|47557223, gi\|... - gi\|47565943\|ref\|ZP_00236982.1\| RibT protein [Bacillus cereus G9241], gi\|47557223\|gb\|EAL15552.1\| RibT... gi\|42783175, gi\|... - gi\|42783175\|ref\|NP_980422.1\| ribT protein [Bacillus cereus ATCC 10987], gi\|42739103\|gb\|AAS43030.1\| r...	174.0	[0..1]	[121..1]
gi\|228597100, gi... - gi\|229186306\|ref\|ZP_04313471.1\| hypothetical protein bcere0004_38510 [Bacillus cereus BGSC 6E1], gi\|... gi\|49333160, gi\|... - gi\|49481604\|ref\|YP_038120.1\| reductase; riboflavin biosynthesis protein [Bacillus thuringiensis sero... gi\|229603704, gi... - gi\|229603704\|ref\|YP_002868360.1\| ribT protein [Bacillus anthracis str. A0248], gi\|229268112\|gb\|ACQ49... gi\|49180895, gi\|... - gi\|49186968\|ref\|YP_030220.1\| ribT protein [Bacillus anthracis str. Sterne], gi\|49180895\|gb\|AAT56271.... gi\|254683829 - gi\|254683829\|ref\|ZP_05147689.1\| ribT protein [Bacillus anthracis str. CNEVA-9066] gi\|47504721, gi\|... - gi\|47529573\|ref\|YP_020922.1\| ribT protein [Bacillus anthracis str. 'Ames Ancestor'], gi\|47504721\|gb\|... gi\|254721664 - gi\|254721664\|ref\|ZP_05183453.1\| ribT protein [Bacillus anthracis str. A1055] gi\|254736176 - gi\|254736176\|ref\|ZP_05193882.1\| ribT protein [Bacillus anthracis str. Western North America USA6153] gi\|254744065 - gi\|254744065\|ref\|ZP_05201748.1\| ribT protein [Bacillus anthracis str. Kruger B] gi\|254754155 - gi\|254754155\|ref\|ZP_05206190.1\| ribT protein [Bacillus anthracis str. Vollum] gi\|254758155 - gi\|254758155\|ref\|ZP_05210182.1\| ribT protein [Bacillus anthracis str. Australia 94] gi\|30258783, gi\|... - gi\|30264138\|ref\|NP_846515.1\| ribT protein [Bacillus anthracis str. Ames], gi\|30258783\|gb\|AAP28001.1\|... gi\|21402115, gi\|... - gi\|65321454\|ref\|ZP_00394413.1\| COG0454: Histone acetyltransferase HPA2 and related acetyltransferase... gi\|196045873, gi... - gi\|196045873\|ref\|ZP_03113102.1\| ribT protein [Bacillus cereus 03BB108], gi\|196023313\|gb\|EDX61991.1\| ... gi\|196038866, gi... - gi\|196038866\|ref\|ZP_03106174.1\| ribT protein [Bacillus cereus NVH0597-99], gi\|196030589\|gb\|EDX69188.... gi\|218905196, gi... - gi\|218905196\|ref\|YP_002453030.1\| ribT protein [Bacillus cereus AH820], gi\|218536826\|gb\|ACK89224.1\| r... gi\|167531028, gi... - gi\|167633622\|ref\|ZP_02391946.1\| ribT protein [Bacillus anthracis str. A0442], gi\|167531028\|gb\|EDR937... gi\|165871140, gi... - gi\|165871140\|ref\|ZP_02215790.1\| ribT protein [Bacillus anthracis str. A0488], gi\|164713059\|gb\|EDR185... gi\|170668785, gi... - gi\|170687168\|ref\|ZP_02878386.1\| ribT protein [Bacillus anthracis str. A0465], gi\|170668785\|gb\|EDT195... gi\|167639570, gi... - gi\|167639570\|ref\|ZP_02397841.1\| ribT protein [Bacillus anthracis str. A0193], gi\|167512629\|gb\|EDR880... gi\|172082009, gi... - gi\|177652674\|ref\|ZP_02935090.1\| ribT protein [Bacillus anthracis str. A0174], gi\|172082009\|gb\|EDT670... gi\|170129418, gi... - gi\|170705878\|ref\|ZP_02896341.1\| ribT protein [Bacillus anthracis str. A0389], gi\|170129418\|gb\|EDS982... gi\|195992406, gi... - gi\|196034867\|ref\|ZP_03102274.1\| ribT protein [Bacillus cereus W], gi\|195992406\|gb\|EDX56367.1\| ribT p... gi\|190566007, gi... - gi\|190566007\|ref\|ZP_03018926.1\| ribT protein [Bacillus anthracis Tsiankovskii-I], gi\|190562926\|gb\|ED... gi\|118418489, gi... - gi\|118479264\|ref\|YP_896415.1\| reductase [Bacillus thuringiensis str. Al Hakam], gi\|118418489\|gb\|ABK8... gi\|225786718, gi... - gi\|225866046\|ref\|YP_002751424.1\| ribT protein [Bacillus cereus 03BB102], gi\|225786718\|gb\|ACO26935.1\|... gi\|227816838, gi... - gi\|227816838\|ref\|YP_002816847.1\| ribT protein [Bacillus anthracis str. CDC 684], gi\|227003435\|gb\|ACP... gi\|228916700, gi... - gi\|228916700\|ref\|ZP_04080265.1\| hypothetical protein bthur0012_39140 [Bacillus thuringiensis serovar... gi\|228929109, gi... - gi\|228929109\|ref\|ZP_04092136.1\| hypothetical protein bthur0010_37980 [Bacillus thuringiensis serovar... gi\|228935380, gi... - gi\|228935380\|ref\|ZP_04098200.1\| hypothetical protein bthur0009_38280 [Bacillus thuringiensis serovar... gi\|228811767, gi... - gi\|228947780\|ref\|ZP_04110067.1\| hypothetical protein bthur0007_39070 [Bacillus thuringiensis serovar... gi\|229123583, gi... - gi\|229123583\|ref\|ZP_04252778.1\| hypothetical protein bcere0016_38700 [Bacillus cereus 95/8201], gi\|2...	174.0	[0..1]	[121..1]

Back

Predicted Domain #1

Region A:
Residues: [1-124]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIRYKKSFE KIAMGLLSFM PNEKDLKQLQ QTIKDYETDT DRQLFLWKED EDIVGAIGVE  60
   61 KKDSEVEIRH ISVNPSHRHQ GIGKQMMDAL KHLFKTQVLV PNELTQSFFE RCQGQQDQDI 120
  121 SYNN

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	3.85
Match:	2pr1A
Description:	No description for 2pr1A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits