YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|190406851
Organism:	Saccharomyces cerevisiae RM11-1a
Length:	174 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190406851.

Description	E-value	Query Range	Subject Range
YGR131W - Protein of unknown function; expression induced in response to ketoconazole; promoter region contain... gi\|190406851 - gi\|190406851\|gb\|EDV10118.1\| non-classical export protein 2 [Saccharomyces cerevisiae RM11-1a] FHN1_YEAST - Non-classical export protein 2 homolog 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN... gi\|151943411 - gi\|151943411\|gb\|EDN61722.1\| conserved protein [Saccharomyces cerevisiae YJM789]	3.0E-66	[1..174]	[1..174]
NCE2_SCHPO - Non-classical export protein 2 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fhn... SPBC1685.13 - non classical export pathway protein	1.0E-43	[19..143]	[24..150]

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Predicted Domain #1

Region A:
Residues: [1-174]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSAADNLVR IINAVFLIIS IGLISGLIGT QTKHSSRVNF CMFAAVYGLV TDSLYGFLAN  60
   61 FWTSLTYPAI LLVLDFLNFI FTFVAATALA VGIRCHSCKN KTYLEQNKII QGSSSRCHQS 120
  121 QAAVAFFYFS CFLFLIKVTV ATMGMMQNGG FGSNTGFSRR RARRQMGIPT ISQV

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits