YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|221319738
Organism:	Bacillus subtilis subsp. subtilis str. JH642
Length:	366 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221319738.

Description	E-value	Query Range	Subject Range
DER_CLOPE, ENGA_... - GTP-binding protein engA OS=Clostridium perfringens GN=engA PE=3 SV=1, GTPase Der OS=Clostridium per... DER_CLOP1 - GTPase Der OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 82... DER_CLOPS - GTPase Der OS=Clostridium perfringens (strain SM101 / Type A) GN=der PE=3 SV=1 gi\|168217042, gi... - gi\|182380862\|gb\|EDT78341.1\| putative GTP-binding protein Era [Clostridium perfringens NCTC 8239], gi... DER_CLOPE - GTPase Der OS=Clostridium perfringens (strain 13 / Type A) GN=der PE=3 SV=1 gi\|169299237, gi... - gi\|169342731\|ref\|ZP_02863772.1\| putative GTP-binding protein Era [Clostridium perfringens C str. JGS... gi\|177908885, gi... - gi\|182625851\|ref\|ZP_02953617.1\| putative GTP-binding protein Era [Clostridium perfringens D str. JGS... gi\|170661368, gi... - gi\|170661368\|gb\|EDT14051.1\| putative GTP-binding protein Era [Clostridium perfringens E str. JGS1987... gi\|170711316, gi... - gi\|170711316\|gb\|EDT23498.1\| putative GTP-binding protein Era [Clostridium perfringens B str. ATCC 36... gi\|170714259, gi... - gi\|170714259\|gb\|EDT26441.1\| putative GTP-binding protein Era [Clostridium perfringens CPE str. F4969...	236.0	[0..1]	[328..8]

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Predicted Domain #1

Region A:
Residues: [1-366]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKVVCIGCG VTIQTEDKTG LGYAPPASLT KENVICQRCF RLKNYNEIQD VSLTDDDFLN  60
   61 ILHGIGETDS LVVKIVDIFD FNGSWINGLQ RLVGGNPILL VGNKADILPK SLKRERLIQW 120
  121 MKREAKELGL KPVDVFLVSA GRGQGIREVI DAIEHYRNGK DVYVVGCTNV GKSTFINRII 180
  181 KEVSGEEDII TTSQFPGTTL DAIEIPLDDG SSLYDTPGII NNHQMAHYVN KKDLKILSPK 240
  241 KELKPRTFQL NDQQTLYFGG LARFDYVSGE RSPFICYMPN ELMIHRTKLE NADALYEKHA 300
  301 GELLTPPGKD EMDEFPELVA HTFTIKDKKT DIVFSGLGWV TVHDADKKVT AYAPKGVHVF 360
  361 VRRSLI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	61.522879
Match:	2hjgA
Description:	No description for 2hjgA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits