| Protein: | gi|220956904 |
| Organism: | synthetic construct |
| Length: | 1145 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220956904.
| Description | E-value | Query Range |
Subject Range |
|
|
1302.0 | [0..1] | [1140..15] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MQIKPIITYS GSCPLFRSLE SQILNAIPLD TCEWRRTFQR PTKHVRLEAQ AQQFNVAALE 60
61 KYKQGDWSIL EHPILHIFVT ECNDVDTYKA TIREAIDIWL KTLTSYGVSD WMILLVETLD 120
121 MRKTKNFMPR TTVL
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [135-202] |
1 11 21 31 41 51
| | | | | |
1 DKIRLDFGTK NDDRCISVLN PAKFEQKSTE SFRCLVQRIR FLMLTSYNRN IVKYEELIRS 60
61 KREKRNIE
|
| Detection Method: | |
| Confidence: | 0.975 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [203-679] |
1 11 21 31 41 51
| | | | | |
1 GWDFRQYFFM QEDLALIFEK LELPTEALIQ YDELDAMFSQ FITHTGLNEK QQWLNHFRKP 60
61 LDAFHGICLT RADKFEMRNK IRDEGVSLLE FRNYLFERQA YLLLTCNDIP EIAKRLLNFL 120
121 FSTLREVELI KLECQEGALC CWEFVCALEV LQLCEQAMEP NELTCFQHCA PIWNLAKDKL 180
181 YELGKLCGLL PGCTPTSEQL HIVVQLSSGI GDAPSEQHQF LQATPQLRDR SPNRKPKKSG 240
241 AEQLKEALGS NQAFQKLYLE LAELAISTYK HVTRLRSARL VGLDLGNFYC ALNEPHKAVG 300
301 FFTDLLRELK AENWHMLSSQ TLLELANCYR KMGDSLAYTK TCSSISCCAE LETLVRTFYF 360
361 DEFLKSLKTL KTTLSAQPSI ENANYCVLED HFRILDIEVV NQKPIIQDDY ILVQLKVESL 420
421 YPRGVVAENV KLCYELEASS LELAMENVSL TASPSTVKAK DTSSRLKVSL QLVYKQD
|
| Detection Method: | |
| Confidence: | 1.12 |
| Match: | 2gw1A |
| Description: | No description for 2gw1A was found. |
|
Region A: Residues: [680-905] |
1 11 21 31 41 51
| | | | | |
1 NRLHSAAVAC DLPKSKQPVR RTSSTKRKLS PSVQADFTNF VQAENIALQP GVNLIEMKAK 60
61 ATRVGCWQFK QLCISMSSLE FLSEQLPFMP ATFEISTKPA SATLEFKTLI AGIVQPISLN 120
121 VSGGSFIFPP DAKITLRCSK NLRIRQARNT DDEAAYNDDQ SFESTLQVPL VQFKSFEERR 180
181 IPLEVLTDMP GRKVSKHHEH HIALNCPWSR TELPIAVDFQ PAMEAT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [906-1145] |
1 11 21 31 41 51
| | | | | |
1 CRLHTCGTQK FLQVIMKGME AHLLLQHAQV KCDVPGVQLL DLNPESQQPI EIYKSLTVTY 60
61 LYEIQVEPLK TEHELPVVKV HFVIKYASLS QPDVWRTYGC AFDLVDYTTL FKLQAQLEPN 120
121 ELCRLRTVCN MNLKITKVHE NPYTDLMYEV LNDQNLWAVC GRSAGVVSMK DVDSHSISLD 180
181 VMPLSTGFLP MPSIRLSKYT AGGKSKTDGH SKVHPFPPGQ VYNSTKSMQI HVIASVAGDQ 240
241
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
