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View Structure Prediction Details

Protein: gi|208966030
Organism: synthetic construct
Length: 204 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|208966030.

Description E-value Query
Range
Subject
Range
gi|109469357, gi... - gi|109471518|ref|XP_001059141.1| PREDICTED: similar to MRG-binding protein [Rattus norvegicus], gi|1...
1.0E-81 [1..204] [75..278]
gi|149034016 - gi|149034016|gb|EDL88799.1| rCG38412, isoform CRA_a [Rattus norvegicus]
MRGBP_MOUSE - MRG/MORF4L-binding protein OS=Mus musculus GN=Mrgbp PE=1 SV=2
2.0E-80 [1..204] [1..204]
gi|37681741 - gi|37681741|gb|AAQ97748.1| chromosome 20 open reading frame 20 [Danio rerio]
4.0E-61 [1..204] [1..217]
gi|220957080, gi... - gi|220957080|gb|ACL91083.1| MrgBP-PA [synthetic construct], gi|220947698|gb|ACL86392.1| MrgBP-PA [sy...
MrgBP-PA - The gene MrgBP is referred to in FlyBase by the symbol Dmel\MrgBP (CG13746, FBgn0033341). It is a pr...
5.0E-56 [12..203] [3..200]
gi|50758767 - gi|50758767|ref|XP_417408.1| PREDICTED: similar to Protein C20orf20 [Gallus gallus]
1.0E-55 [15..204] [14..205]
gi|71895785, gi|... - gi|71895785|ref|NP_001025681.1| MGC97807 protein [Xenopus (Silurana) tropicalis], gi|62530962|gb|AAH...
1.0E-51 [1..204] [1..200]

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Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEAEVGGGG AAGDKGPGEA ATSPAEETVV WSPEVEVCLF HAMLGHKPVG VNRHFHMICI  60
   61 RDKFSQNIGR QVPSKVIWDH LSTMYDMQAL HESEILPFPN PERNFVLPEE IIQEVREGKV 120
  121 MI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 38.408935
Match: PF07904.4
Description: No description for PF07904.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [123-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEEMKEEMKE DVDPHNGADD VFSSSGSLGK ASEKSSKDKE KNSSDLGCKE GADKRKRSRV  60
   61 TDKVLTANSN PSSPSAAKRR RT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle