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View Structure Prediction Details

Protein: COX5C_ORYSA
Organism: Oryza sativa
Length: 63 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COX5C_ORYSA.

Description E-value Query
Range		 Subject
Range
gi|357161933|ref... - PREDICTED: cytochrome c oxidase subunit 5C-like [Brachypodium distachyon], PREDICTED: cytochrome c o...
COX5C_HORVU - Cytochrome c oxidase subunit 5C OS=Hordeum vulgare GN=COX5C PE=3 SV=3
gi|1070356 - gi|1070356|emb|CAA92107.1| cytochrome c oxidase, Vc subunit [Hordeum vulgare subsp. vulgare]
 112.0 [0..1] [63..1]
CX5C2_ARATH - Cytochrome c oxidase subunit 5C-2 OS=Arabidopsis thaliana GN=At3g62400 PE=2 SV=1
 111.0 [0..1] [63..1]
CX5C2_HELAN - Cytochrome c oxidase subunit 5C-2 OS=Helianthus annuus GN=COX5C2 PE=3 SV=1
 111.0 [0..1] [63..1]
COX5C_IPOBA - Cytochrome c oxidase subunit 5C OS=Ipomoea batatas GN=COX5C PE=1 SV=3
 108.0 [0..1] [63..1]
gi|4105786 - gi|4105786|gb|AAD02550.1| PGPS/D8 [Petunia x hybrida]
 98.0 [0..3] [63..2]

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Predicted Domain #1
Region A:
Residues: [1-63] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGRIAHAT LKGPSVVKEI CIGLTLGLVA GGLWKMHHWN EQRKTRSFYD MLEKGQISVV  60
   61 VEE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 46.221849
Match: PF05799.3
Description: No description for PF05799.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle