YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|119389192, gi...
Organism:	Homo sapiens
Length:	119 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|119389192, gi....

Description	E-value	Query Range	Subject Range
gi\|76656980 - gi\|76656980\|ref\|XP_881664.1\| PREDICTED: similar to Dipeptidyl-peptidase I precursor (DPP-I) (DPPI) (...	204.0	[0..1]	[119..25]
CATC_PONPY - Dipeptidyl-peptidase 1 precursor - Pongo pygmaeus (Orangutan) CATC_PONAB - Dipeptidyl peptidase 1 OS=Pongo abelii GN=CTSC PE=2 SV=1	203.0	[0..1]	[119..25]
gi\|114639718 - gi\|114639718\|ref\|XP_001135536.1\| PREDICTED: cathepsin C isoform 1 [Pan troglodytes]	201.0	[0..1]	[119..25]
gi\|33327024 - gi\|33327024\|gb\|AAQ08887.1\| cathepsin C [Homo sapiens]	201.0	[0..1]	[119..25]
gi\|54696504, gi\|... - gi\|61368212\|gb\|AAX43131.1\| cathepsin C [synthetic construct], gi\|61368207\|gb\|AAX43130.1\| cathepsin C...	201.0	[0..1]	[119..25]

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Predicted Domain #1

Region A:
Residues: [1-119]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DTPANCTYLD LLGTWVFQVG SSGSQRDVNC SVMGPQEKKV VVYLQKLDTA YDDLGNSGHF  60
   61 TIIYNQGFEI VLNDYKWFAF FKYKEEGSKV TTYCNETMTG WVHDVLGRNW ACFTGKKVG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	50.69897
Match:	1jqpA
Description:	Dipeptidyl peptidase I (cathepsin C), exclusion domain; Cathepsin C (dipeptidyl peptidase I), catalytic domain
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits