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View Structure Prediction Details

Protein: gi|221324311
Organism: Bacillus subtilis subsp. subtilis str. SMY
Length: 202 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221324311.

Description E-value Query
Range
Subject
Range
gi|56910672, gi|... - gi|56964429|ref|YP_176160.1| succinate dehydrogenase cytochrome b558 subunit [Bacillus clausii KSM-K...
166.0 [0..1] [202..1]

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Predicted Domain #1
Region A:
Residues: [1-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGNREFYFR RLHSLLGVIP VGIFLIQHLV VNQFAARGAE AFNSAAHFMD SLPFRYALEI  60
   61 FIIFLPLIYH AVYGVYIAFT AKNNAGQYSY MRNWLFVLQR VTGIITLIFV SWHVWETRIA 120
  121 AQMGAEVNFD MMANILSSPA MLGFYIVGVL STIFHFSNGL WSFAVTWGIT VTPRSQRIST 180
  181 YVTLIIFVAL SYVGLKAIFA FV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.69897
Match: 2bs2C
Description: No description for 2bs2C was found.

Predicted functions:

Term Confidence Notes
succinate dehydrogenase activity 3.77307162030081 bayes_pls_golite062009
oxidoreductase activity 2.006262138179 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 1.40315688445419 bayes_pls_golite062009
electron carrier activity 1.35460962236208 bayes_pls_golite062009
catalytic activity 1.34226547326392 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle