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View Structure Prediction Details

Protein: gi|48425689
Organism: Homo sapiens
Length: 182 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|48425689.

Description E-value Query
Range
Subject
Range
gi|74002027 - gi|74002027|ref|XP_544943.2| PREDICTED: similar to anthrax toxin receptor 2 [Canis familiaris]
163.0 [0..2] [182..196]
gi|62089412 - gi|62089412|dbj|BAD93150.1| anthrax toxin receptor 2 variant [Homo sapiens]
163.0 [0..2] [182..52]
gi|116003875, gi... - gi|116003875|ref|NP_001070294.1| anthrax toxin receptor 2 [Bos taurus], gi|115305014|gb|AAI23758.1| ...
163.0 [0..2] [182..38]
gi|114594044 - gi|114594044|ref|XP_001144933.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
162.0 [0..2] [182..38]
gi|94482904 - gi|94482904|gb|ABF22495.1| anthrax toxin receptor 2 [Rattus norvegicus]
161.0 [0..2] [182..38]

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Predicted Domain #1
Region A:
Residues: [1-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSCRRAFDLY FVLDKSGSVA NNWIEIYNFV QQLAERFVSP EMRLSFIVFS SQATIILPLT  60
   61 GDRGKISKGL EDLKRVSPVG ETYIHEGLKL ANEQIQKAGG LKTSSIIIAL TDGKLDGLVP 120
  121 SYAEKEAKIS RSLGASVYCV GVLDFEQAQL ERIADSKEQV FPVKGGFQAL KGIINSILAQ 180
  181 SC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.30103
Match: 1shuX
Description: Crystal Structure of the von Willebrand factor A domain of human capillary morphogenesis protein 2: an anthrax toxin receptor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.0650247416983729 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle