| Protein: | gi|190404787 |
| Organism: | Saccharomyces cerevisiae RM11-1a |
| Length: | 337 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190404787.
| Description | E-value | Query Range |
Subject Range |
|
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1.0E-81 | [1..337] | [1..337] |
|
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5.0E-60 | [19..336] | [25..377] |
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1.0E-58 | [19..336] | [43..377] |
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1.0E-57 | [20..336] | [5..295] |
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5.0E-53 | [23..336] | [6..323] |
|
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2.0E-48 | [20..319] | [23..331] |
|
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4.0E-47 | [23..333] | [8..293] |
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2.0E-41 | [66..336] | [1..306] |
|
Region A: Residues: [1-101] |
1 11 21 31 41 51
| | | | | |
1 MKNDNKLQKE ALMRLSQLRF PFADAPSIVQ AHQKDEQIQG LLIMKVTELC KLIKSQLFVN 60
61 SYPKELSIFA KLLYLLFTTG RRGRTLGEEY VDLTYTNRKG T
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.888 | 0.336 | peroxisomal membrane | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.718 | 0.336 | peroxisomal membrane | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.884 | 0.336 | peroxisomal membrane | a.47.2 | t-snare proteins |
| View | Download | 0.810 | 0.336 | peroxisomal membrane | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.692 | 0.336 | peroxisomal membrane | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.676 | 0.336 | peroxisomal membrane | a.46.1 | Methionine synthase domain |
| View | Download | 0.656 | 0.336 | peroxisomal membrane | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.582 | 0.336 | peroxisomal membrane | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.582 | 0.336 | peroxisomal membrane | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.570 | 0.336 | peroxisomal membrane | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.487 | 0.336 | peroxisomal membrane | a.29.2 | Bromodomain |
| View | Download | 0.480 | 0.336 | peroxisomal membrane | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.473 | 0.336 | peroxisomal membrane | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.473 | 0.336 | peroxisomal membrane | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.467 | 0.336 | peroxisomal membrane | a.24.3 | Cytochromes |
| View | Download | 0.464 | 0.336 | peroxisomal membrane | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.450 | 0.336 | peroxisomal membrane | a.24.4 | Hemerythrin |
| View | Download | 0.439 | 0.336 | peroxisomal membrane | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.436 | 0.336 | peroxisomal membrane | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.431 | 0.336 | peroxisomal membrane | a.118.1 | ARM repeat |
| View | Download | 0.428 | 0.336 | peroxisomal membrane | a.26.1 | 4-helical cytokines |
| View | Download | 0.404 | 0.336 | peroxisomal membrane | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.390 | 0.336 | peroxisomal membrane | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.389 | 0.336 | peroxisomal membrane | a.90.1 | Transcription factor STAT-4 N-domain |
| View | Download | 0.379 | 0.336 | peroxisomal membrane | a.5.4 | Elongation factor TFIIS domain 2 |
| View | Download | 0.367 | 0.336 | peroxisomal membrane | a.118.16 | Testis/brain RNA-binding protein (TB-RBP) |
| View | Download | 0.366 | 0.336 | peroxisomal membrane | a.26.1 | 4-helical cytokines |
| View | Download | 0.366 | 0.336 | peroxisomal membrane | a.118.8 | TPR-like |
| View | Download | 0.360 | 0.336 | peroxisomal membrane | a.2.3 | Chaperone J-domain |
| View | Download | 0.351 | 0.336 | peroxisomal membrane | a.7.1 | Spectrin repeat |
| View | Download | 0.339 | 0.336 | peroxisomal membrane | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.333 | 0.336 | peroxisomal membrane | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.332 | 0.336 | peroxisomal membrane | a.26.1 | 4-helical cytokines |
| View | Download | 0.330 | 0.336 | peroxisomal membrane | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.327 | 0.336 | peroxisomal membrane | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.318 | 0.336 | peroxisomal membrane | a.2.7 | tRNA-binding arm |
| View | Download | 0.309 | 0.336 | peroxisomal membrane | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.294 | 0.336 | peroxisomal membrane | a.26.1 | 4-helical cytokines |
| View | Download | 0.291 | 0.336 | peroxisomal membrane | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.279 | 0.336 | peroxisomal membrane | a.26.1 | 4-helical cytokines |
| View | Download | 0.277 | 0.336 | peroxisomal membrane | a.2.3 | Chaperone J-domain |
| View | Download | 0.277 | 0.336 | peroxisomal membrane | a.24.3 | Cytochromes |
| View | Download | 0.276 | 0.336 | peroxisomal membrane | a.112.1 | Description not found. |
| View | Download | 0.274 | 0.336 | peroxisomal membrane | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.271 | 0.336 | peroxisomal membrane | a.26.1 | 4-helical cytokines |
| View | Download | 0.270 | 0.336 | peroxisomal membrane | d.95.2 | Homing endonucleases |
| View | Download | 0.255 | 0.336 | peroxisomal membrane | a.74.1 | Cyclin-like |
| View | Download | 0.255 | 0.336 | peroxisomal membrane | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.254 | 0.336 | peroxisomal membrane | a.24.12 | Outer surface protein C (OspC) |
| View | Download | 0.252 | 0.336 | peroxisomal membrane | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.251 | 0.336 | peroxisomal membrane | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.251 | 0.336 | peroxisomal membrane | a.74.1 | Cyclin-like |
| View | Download | 0.248 | 0.336 | peroxisomal membrane | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.246 | 0.336 | peroxisomal membrane | a.2.1 | GreA transcript cleavage protein, N-terminal domain |
| View | Download | 0.241 | 0.336 | peroxisomal membrane | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.240 | 0.336 | peroxisomal membrane | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.239 | 0.336 | peroxisomal membrane | a.26.1 | 4-helical cytokines |
| View | Download | 0.238 | 0.336 | peroxisomal membrane | a.7.1 | Spectrin repeat |
| View | Download | 0.235 | 0.336 | peroxisomal membrane | a.29.2 | Bromodomain |
| View | Download | 0.232 | 0.336 | peroxisomal membrane | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.231 | 0.336 | peroxisomal membrane | a.17.1 | p8-MTCP1 |
| View | Download | 0.228 | 0.336 | peroxisomal membrane | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.225 | 0.336 | peroxisomal membrane | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.222 | 0.336 | peroxisomal membrane | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.221 | 0.336 | peroxisomal membrane | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.221 | 0.336 | peroxisomal membrane | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.220 | 0.336 | peroxisomal membrane | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.218 | 0.336 | peroxisomal membrane | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.214 | 0.336 | peroxisomal membrane | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.212 | 0.336 | peroxisomal membrane | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.205 | 0.336 | peroxisomal membrane | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.201 | 0.336 | peroxisomal membrane | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| Term | Confidence | Notes |
| nucleic acid binding | 1.94188352248723 | bayes_pls_golite062009 |
|
Region A: Residues: [102-285] |
1 11 21 31 41 51
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1 RLAGRLKMIV FAFAYPLCPY FITKLYKKIM KNNKESKIED TESVAAFCKG LLDFILDVHM 60
61 TLFYFKGAFY SISKRIFGMR YVFKHILSKN EANFREEGSQ KYKVLGYILL AQNVMKWYPV 120
121 LTSTLGSWIY GRKRTNDSIT RSSVGLQERS EHESIEGIPK ESQLTHINLS DKNQLPFIPE 180
181 ASRK
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| Detection Method: | |
| Confidence: | 77.24799 |
| Match: | 1fbvA_ |
| Description: | Cbl; N-terminal domain of cbl (N-cbl); CBL |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [286-337] |
1 11 21 31 41 51
| | | | | |
1 CILCLMNMSD PSCAPCGHLF CWSCLMSWCK ERPECPLCRQ HCQPQEILVL RQ
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| Detection Method: | |
| Confidence: | 77.24799 |
| Match: | 1fbvA_ |
| Description: | Cbl; N-terminal domain of cbl (N-cbl); CBL |
| Matching Structure (courtesy of the PDB): |
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